Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01148 ATGGCAGAAAGAAGGGTTTTCACCCTCTCACAGGTTGCCCAACACAAATCCAACAAAGACTCTTGGATGGTGATCAATGGCAGAGTGTTGGATGTGACAAAGTTCTTGGAGGAACATCCGGGAGGGGAAGAGGTGCTTCTAGAGGTGGCAGGGAAGGATGCAACCAAGGAGTTTGATGCTATTGGACACAGCAAAGAAGCTCAAAAATTGGTCCCCAAATACCAAGTGGGTGTCCTCCAAGGTGCCACTGTTGAAGAGGTAGACTTTAAGGATGTTATGGACAAGGGACCAAAGAGCAAAGAGATGAGTGCCTTTGTGATCAAAGAGGATGGGGTGTCCAAGTCTGTGACATTTTATGAGTTCTTTATTCCGATTCTTCTTGCCACTCTCTATTTTGGTTACCGATGCCTCACCAAAGCGGACCCTAATACTTACTAG 438 0.4635 MAERRVFTLSQVAQHKSNKDSWMVINGRVLDVTKFLEEHPGGEEVLLEVAGKDATKEFDAIGHSKEAQKLVPKYQVGVLQGATVEEVDFKDVMDKGPKSKEMSAFVIKEDGVSKSVTFYEFFIPILLATLYFGYRCLTKADPNTY* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01148 145 Pfam Cytochrome b5-like Heme/Steroid binding domain 8 79 IPR001199 -
Rops10g01148 145 FunFam Cytochrome b5 type B 1 84 - -
Rops10g01148 145 Gene3D - 1 85 IPR036400 -
Rops10g01148 145 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 3 84 IPR036400 -
Rops10g01148 145 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 4 80 IPR001199 -
Rops10g01148 145 PANTHER CYTOCHROME B5 3 137 - -
Rops10g01148 145 PRINTS Cytochrome B5 signature 67 79 IPR001199 -
Rops10g01148 145 PRINTS Cytochrome B5 signature 39 53 IPR001199 -
Rops10g01148 145 PRINTS Cytochrome B5 signature 29 39 IPR001199 -
Rops10g01148 145 PRINTS Cytochrome B5 signature 54 61 IPR001199 -
Rops10g01148 145 SMART Cyt_b5_2 7 80 IPR001199 -
Rops10g01148 145 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 35 42 IPR018506 GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01148 Rops-Chr10 23665717 23666498 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01148 2 139 NADPH P450 reductases AT5G48810 44.366 3.42e-33 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01148 - - gmx:113001935 225.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01148 10 23665717 23666498 Rops10g01148 10 23665717 23666498 ECH