Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops10g01135 | ATGGAGACTCGTGCCTCAAAGAAGAGGGCAAACACTGCCGCACCAATCCTAGTCAACAATCAACAACACAAGAAGAAACGGGTTGTGTTGGGGGAACTTCCCAATCTACCCAACTTTCTTCTTCCTGCAACCTTGAATCAACCCAAACAGAAACTCCAATGTCGGAAGAATCCCAAGCTCAAGAAACCAGCTTCTAATCTCCCCTTGCCAGATTTCAAGTCGGTGAAGCCATTTAACAGTGACGAGGATGCCACGTGTAACGATCCACGGAATAGTGAACCTTATGTTTCCGACATCTTCAACTACCTTCATTCAATGGAGATGGAGAAAAAAAGAAGACCAATGATCGATTACATTCAGAAAGTTCAGAGAGGTGTTACTACTAACATGAGAGGGATATTGGTGGATTGGTTAGTAGAGGTTGCAGAGGAGTACAAGCTTCTCTCTGATACCCTTTATCTCTCTGTTTCCTACATCGATAGGTTCCTATCTGTTAACCCTGTCACTAAGTCCAAGCTTCAATTGCTGGGTGTTTCGTCCATGCTCATTGCATCCAAGTATGAAGAAATTAGTCCACCCAAAGCGAGAGATTTTTGCTCAATTACTGATAACACGTACAACAAGAAAGAGGTTGTAAAGATGGAAGCTGACATACTAAAAGCCCTAAATTTTGAAATGGGCAACCCAACTGTAAACACCTTTCTAAGGAGGTTTGCTGGGATTGCTTCTGAGAATCAAAACACTCTAGATTTGAAGACTGAATTTCTAGGAAACTATCTTGCTGAGCTGAGTTTGTTGGACTGTGATTGTATAAGATTCTTGCCTTCTATTGTGGCTGCATCAGTTATATTTCTTGCCAGATTCATTATCAACCCTGAAGTGCATCCTTGGACTTCATCCCTATGTGAATGCTCGGGTTATAAATCAGCTGAATTGAAAGAATGTGTTCTCATCTTACATGACTTGTATTTGTCAAGAAGGGCAGCATCATTCCAAGCTATTCGGGATAAATACAAGCAGCACAAGTTCAAATACGTGGCAAACCTGCCTTCCCCACCAGAGGTACCGAATAATTACTTTGAAGAACAATGA | 1092 | 0.4176 | METRASKKRANTAAPILVNNQQHKKKRVVLGELPNLPNFLLPATLNQPKQKLQCRKNPKLKKPASNLPLPDFKSVKPFNSDEDATCNDPRNSEPYVSDIFNYLHSMEMEKKRRPMIDYIQKVQRGVTTNMRGILVDWLVEVAEEYKLLSDTLYLSVSYIDRFLSVNPVTKSKLQLLGVSSMLIASKYEEISPPKARDFCSITDNTYNKKEVVKMEADILKALNFEMGNPTVNTFLRRFAGIASENQNTLDLKTEFLGNYLAELSLLDCDCIRFLPSIVAASVIFLARFIINPEVHPWTSSLCECSGYKSAELKECVLILHDLYLSRRAASFQAIRDKYKQHKFKYVANLPSPPEVPNNYFEEQ* | 364 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops10g01135 | 363 | SMART | Cyclin_C_2 | 229 | 352 | IPR004367 | - | |
Rops10g01135 | 363 | Gene3D | - | 98 | 348 | - | - | |
Rops10g01135 | 363 | PANTHER | CYCLINS | 71 | 340 | IPR039361 | - | |
Rops10g01135 | 363 | MobiDBLite | consensus disorder prediction | 50 | 72 | - | - | |
Rops10g01135 | 363 | FunFam | Cyclin superfamily protein, putative | 226 | 298 | - | - | |
Rops10g01135 | 363 | Pfam | Cyclin, N-terminal domain | 98 | 226 | IPR006671 | - | |
Rops10g01135 | 363 | SUPERFAMILY | Cyclin-like | 229 | 353 | IPR036915 | - | |
Rops10g01135 | 363 | CDD | CYCLIN_AtCycA-like_rpt2 | 229 | 343 | - | - | |
Rops10g01135 | 363 | Gene3D | - | 112 | 227 | - | - | |
Rops10g01135 | 363 | Pfam | Cyclin, C-terminal domain | 229 | 351 | IPR004367 | - | |
Rops10g01135 | 363 | FunFam | G2/mitotic-specific cyclin | 114 | 225 | - | - | |
Rops10g01135 | 363 | SMART | cyclin_7 | 233 | 321 | IPR013763 | - | |
Rops10g01135 | 363 | SMART | cyclin_7 | 136 | 220 | IPR013763 | - | |
Rops10g01135 | 363 | ProSitePatterns | Cyclins signature. | 131 | 162 | IPR006671 | - | |
Rops10g01135 | 363 | SUPERFAMILY | Cyclin-like | 87 | 226 | IPR036915 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops10g01135 | Rops-Chr10 | 23510002 | 23512412 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops10g01135 | 1 | 362 | Core Cell Cycle Gene Families | AT5G43080 | 56.354 | 3.04e-141 | 403 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops10g01135 | K06627 | - | gmx:100787417 | 488.804 |