Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01130 ATGGAATTCTTGAGTATAATGTTTTCCTTGTTGATCCTAGCTTCAGTTTCATATTCAGCAGTCGATGTTCTCCGCCAGGGTTCATCCCTGTCAGTGGAGAAACAAGACGTTCTTCTTTCACAAAATGGCATATTCTCCGCTGGCTTTCATGCCGTCGGTGATAATGCTTATTGCTTTGCCGTGTGGTTCACCCAAAACCCCACCTTAGTTTGGATGGCAAACCGTGATCAACCTGTACATGGAAAGCGCACAAAACTATCCCTTCTCAAAACCGGCAATCTTCTCTTACAAGATGCCGGTGAGTTCACTGTTTGGTCCACCGACACTTCTTCCCCGTCGTCCGTCGAGTTGGTTCTCAGAAACACCGGCAACCTCGTTCTACACACCGATGTAGGTGTCGTTTTGTGGCAGAGCTTTGATTTCCCGACCGATACTTTGCTTCCTCAACAACTACTCACTAGGAATACAAAGCTCATCTCCTCAAGAAGTGAGAGTAACCACTGCTCAGGTTTTTATAATCTGTTTTTTGACAACGACAACGTTATTCGCCTTCTTTACAATGGCCCTGAAATTTCAAGCGTTTACTGGCCGAGTCCTGGGAAGGTGAGCTGGGACGTAGGAAGGACGACTTACAATGCAAGTAGGATTGCAGTGCTTGACTCTTTGGGAAGGTTCAAATCATCAGATAGTCTCCGTTTCATAACATCTGATTATGACACTGTACTTCAAAGAAGATTAAAAGTTGATTCCGATGGCAATATTCGAGTCTATAGCAGGAAAGATGGAACAAAGGAGTGGTATGTGTCATGGCAAGCCATATCAAAACCTTGTACCATTCATGGCATATGTGGTGCTAACAGCATGTGTAACTATGATCCTGCAGGTTCCGGAAGGAAATGCTCTTGCCTTCCAGGTCATAAACTCAAGAATGGCGATGATTGGTCTCTGGGGTGTGAACCAATATACCATTCTTCTTGCAACACAAGTGGTAACGGGTCTTACTTTCTACACCTACCCAATGTTGATTTCTATGGTTATGATTTTGGATTTTTCTCCAATTACACTTTAGAGGGATGCTTGAAGATATGCCAGCAATCCTGCCGCTGCAAAGGCGTTCAGTATAGATATATTATAAGAGTCAACCAGTTTAATTGTTACATAAAATCGATGTTGTTGAATGGCTATCGTTCACCAGATTTGCCAGGAGCTGTCTACTTGAGATTGCCTGTGAGTTTCAGGCAGTACACACAGCCTGAAACATTGGCTGAAGGGTTAAACAAGTCTTGTAATTCCAGTAGAACAATATTACTTGATAGAAAGTATGATAAAAGCCATCAAAATGGAAAGATAAAGCTCCTCCTCTGGTTTCCTCCTTGTCTAGGAGTGCTCGAGATCATGTGTATCCTTTTGGTTTGGTGCTTCCTCGTAAGAACCCGACGACAGTCTGATGCAGAAGCACAAGGTTACCTTCCAGTAGGCACTGTGTTTAAAAAATATGGATACTCTGAGCTGAAAGATGCATCGAGAGGTTTCACTGAGGAGATTGGAAGAGGCGCGACTGGGATTGTGTACAAAGGTGAATTTCCAGATCACAGAGTCGTGGCAATAAAGAGACTTGGTGGTGAAGCTTATCAAGGAGGGGATGATTTTCTCGGTGAAGTTAGCATCATTGGAAGGCTTAACCACATGAACTTGATCAAAATGTGGGGTTACTGTGCAGAGGGCAAGCACAGGCTATTGATATATGAGTACATGGAGAATGGTTCATTGGCTGAAAATCTTGTCTCCGATACCTTGGATTTCAATAGAAGGTTCGACATTGCATTGGGTATGGCTAGGGGTCTAGCCTATTTGCATGAAGAATGCTTGGAGTGGATTTTGCATTGTGATGTGAAGCCTCAAAACATACTTTTGGATTCTAATTTTCAACCCAAGGTAGCAGATTTTGGCCTGTCCAAGCTACTGAAGAGAAATGACTCTAAAAATTGGAAATTCTCCCACATAAGAGGCACCAGAGGCTATATGGCTCCTGAGTGGGTTTACAATTTGCCAATTACCTCAAAAGTAGATGTCTATAGCTATGGAATTGTGGTGCTGGAGATGGTGACTGGAAAGAGCCCTGCAATGGGAGTCCAAGAAGTTGATGGTGCAGAAGCGAGGCAACATTGGAGGCTGGTTACATGGGTGAGGGAGAAAAGTGTTATAGGATCCTCTGATTCATCGTGGTTGCAGGAGATAGTGGACCCTGTTATAGAAAGGGAATATGACTCGGACAGACTGCAAATTTTGGTTGAAGTGGCTTTAAAATGCGTAGAAGAAGACAGAGATGCAAGACCTACAATGAGGCGTATTGTGGAGCTGCTTCAAAGCCATGAAATTGATTGA 2385 0.4348 MEFLSIMFSLLILASVSYSAVDVLRQGSSLSVEKQDVLLSQNGIFSAGFHAVGDNAYCFAVWFTQNPTLVWMANRDQPVHGKRTKLSLLKTGNLLLQDAGEFTVWSTDTSSPSSVELVLRNTGNLVLHTDVGVVLWQSFDFPTDTLLPQQLLTRNTKLISSRSESNHCSGFYNLFFDNDNVIRLLYNGPEISSVYWPSPGKVSWDVGRTTYNASRIAVLDSLGRFKSSDSLRFITSDYDTVLQRRLKVDSDGNIRVYSRKDGTKEWYVSWQAISKPCTIHGICGANSMCNYDPAGSGRKCSCLPGHKLKNGDDWSLGCEPIYHSSCNTSGNGSYFLHLPNVDFYGYDFGFFSNYTLEGCLKICQQSCRCKGVQYRYIIRVNQFNCYIKSMLLNGYRSPDLPGAVYLRLPVSFRQYTQPETLAEGLNKSCNSSRTILLDRKYDKSHQNGKIKLLLWFPPCLGVLEIMCILLVWCFLVRTRRQSDAEAQGYLPVGTVFKKYGYSELKDASRGFTEEIGRGATGIVYKGEFPDHRVVAIKRLGGEAYQGGDDFLGEVSIIGRLNHMNLIKMWGYCAEGKHRLLIYEYMENGSLAENLVSDTLDFNRRFDIALGMARGLAYLHEECLEWILHCDVKPQNILLDSNFQPKVADFGLSKLLKRNDSKNWKFSHIRGTRGYMAPEWVYNLPITSKVDVYSYGIVVLEMVTGKSPAMGVQEVDGAEARQHWRLVTWVREKSVIGSSDSSWLQEIVDPVIEREYDSDRLQILVEVALKCVEEDRDARPTMRRIVELLQSHEID* 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01130 794 ProSiteProfiles Bulb-type lectin domain profile. 21 140 IPR001480 -
Rops10g01130 794 CDD PAN_AP_plant 323 409 - -
Rops10g01130 794 CDD B_lectin 38 142 IPR001480 -
Rops10g01130 794 ProSiteProfiles Protein kinase domain profile. 509 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g01130 794 Pfam D-mannose binding lectin 68 157 IPR001480 -
Rops10g01130 794 Pfam Protein kinase domain 512 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g01130 794 Gene3D Transferase(Phosphotransferase) domain 1 585 794 - -
Rops10g01130 794 Gene3D - 15 141 IPR036426 -
Rops10g01130 794 PIRSF SRK 1 793 IPR024171 GO:0004674
Rops10g01130 794 ProSitePatterns Protein kinases ATP-binding region signature. 515 537 IPR017441 GO:0005524
Rops10g01130 794 SMART serkin_6 509 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g01130 794 PANTHER OS07G0415500 PROTEIN 7 790 - -
Rops10g01130 794 ProSiteProfiles PAN/Apple domain profile. 326 410 IPR003609 -
Rops10g01130 794 FunFam S-receptor-like serine/threonine-protein kinase 478 584 - -
Rops10g01130 794 ProSitePatterns Serine/Threonine protein kinases active-site signature. 626 638 IPR008271 GO:0004672|GO:0006468
Rops10g01130 794 SMART blect_4 29 142 IPR001480 -
Rops10g01130 794 SUPERFAMILY Protein kinase-like (PK-like) 496 789 IPR011009 -
Rops10g01130 794 Pfam S-locus glycoprotein domain 237 309 IPR000858 GO:0048544
Rops10g01130 794 Gene3D Phosphorylase Kinase; domain 1 475 584 - -
Rops10g01130 794 FunFam Serine/threonine-protein kinase 585 794 - -
Rops10g01130 794 SUPERFAMILY alpha-D-mannose-specific plant lectins 59 199 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01130 Rops-Chr10 23440095 23442479 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01130 466 789 Receptor kinase-like Gene Family AT5G45780 36.036 3.42e-59 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Rops10g01130 Pkinase 6.3e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01130 - - jre:108987254 971.459