Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01128 ATGGAATTCATGGGTATGGTGTTTTCGTTGCTGATCCTAGCTTCAGTTTCATGTTCAGCCGTCCATGTTCTCTACAAGGGTTCATCCCTGTCAGTGGAGAAACATGACGTTCTTCTTTCACAAAATGGCGTATTCTCCGCTGGCTTTCATGCTGTTGGTACTAATGCTTACTGTTTCGCAGTGTGGTTCACCCAAAACCCCACCATAGTTTGGATGGCGAACCGTGACCAACCCGTAAACGGAAAGCGCTCAAAACTATCCCTTCTCAAAACCGGTAATCTTCTTTTACAAGATGCCGATGAGTTCATCGTTTGGTCCACTGATACTTCTTCATCGTCGTCCGTCGAGTTGGTTCTCAGCAACACCGGCAACCTCATTCTACGTGAAACTGATGTAGGTGTCCGCGTCCCTTTATGGCAGAGCTTTGATTTCCCGACCGATACTTTGCTTCCTCAACAACCACTCACTAGGAATACAAAGCTTATCTCCTCAAGAAGTAAGAGTAACCACTCCTCAGGTTTTTATAATCTGTTTTTCGACAACGACAACGTTATTAGCCTTCTTTACAATGGCTACGAAATTTCTAGTATTTACTGGCCAGATCCTGAGCTGGGTAGCTTGGGGGCAGGAAGGACCACGTACAATGCAACTAGGATTGCAGTGCTTGATTCTTTTGGAAGTTTCACTTCATCGGATGATCTTAGTTTCATAACATCCGATTATGGGACTGTGCTTCAGAGAAGATTAAAAGTTGATTCCGATGGCAATATTAGAGTCTACAGCCGGGAAGATGGGACAAAGGAGTGGCATGTGTCATGGCAAGCCATATCAAAACCTTGTACCATTCATGGCATATGTGGTGCTAATAGCATTTGTAGTTATGATCCTGCTGGTTCCGGAAGGAAATGCTCCTGCGTTCCAGGTTTTAAACTCAAGAAGGGTAGTGATTGGTCAGAGGGATGTGAACCAACATTCCATTCTTCCTGCAACAAAAGTGGCATTGGGTCTGACTTTCTACGCCTACCCCATGTTGATTTCTTTGGTTACGATGCTGATTTTTTCCCTAATTACACTTTACAGGAATGCTTGAAGATATGCCTGCAGTCCTGCGACTGCAAAAGCATTCAGTATAAATATATTATCGAAGATAACCAGTTTAACTGTTACCCGAAAACTATGTTGTTGAATGGGTATCGTTCAACCTATTTCCCAGGAGCTATCTACTTGAAACTGCCTGCAAGTTTCAAGCAGGACACACTGCCTGAAGCATTGGTTGAAGGGTTAAATACATCTTGTAATTCCAGCAGAACAATATTGCTGGATAGGAAGTATGATAAAAGCCATCAAAATGGAAAGGTAAAGCTCCTCCTCTGGTTTGCTCCTTGTTTAGGAGTGCTCGAGATCATGTGTATCCTTTTGGTTTGGTGCTTCCTCGTAAGAACCCGACGACAGTCTAATGCAGAAGCACAAGGTTACCTTCCCGTAGGCACTGTGTTTAAAAAGTATGGATACTCTGAGCTGAAAGATGCATCGAGAGGTTTCACTGAGGAGATTGGAAGAGGCGCTACTGGGATTGTGTACAAAGGTGAATTTCCAGATCACAGAGTCGTGGCAATAAAGAGACTTGGTGGTGAAGCTTATCAAGGAGGGGATGATTTTCTCGGTGAAGTTAGCATCATTGGAAGGCTTAACCACATGAACTTGATCAAAATGTGGGGTTACTGTGCAGAGGGCAAGCACAGGCTATTGATATATGAGTACATGGAGAATGGTTCATTGGCTGAAAATCTTGTCTCCGATACCTTGGATTTCAATAGAAGGTTCGACATTGCATTGGGTATGGCTAGGGGTCTAGCCTATTTGCATGAAGAATGCTTGGAGTGGATTTTGCATTGTGATGTGAAGCCTCAAAACATACTTTTGGATTCTAATTTTCAACCCAAGGTAGCAGATTTTGGCCTGTCCAAGCTACTGAAGAGAAATGACTCTAGAAATTGGAAATTCTCCCACATAAGGGGCACCAGAGGCTATATGGCTCCTGAGTGGGTTTACAATTTGCCAATTACCTCAAAAGTAGATGTCTATAGCTATGGAATTGTGGTGCTGGAGATGGTGACTGGAAAGAGCCCTGCAATGGGAGTCCAAGAAGTTGATGGTGCAGAAGCGAGGCATCATTGGAGGCTGGTTACATGGGTGAGGGAGAAAAGTATTATAGGATCCTCTGATGCATCGTGGTTGGAGGAGATAGTGGACCCTGTTATAGAAAGAAAATATGACTCGGACAGACTGCAAATTTTGGTTGAAGTGGCTTTAAAATGCGTAGAAGAAGACAGAGATGCAAGGCCTACAATGAAGCGTGTTGTGGAGATGCTACAAAGCCATGAAAATGATTAA 2394 0.4361 MEFMGMVFSLLILASVSCSAVHVLYKGSSLSVEKHDVLLSQNGVFSAGFHAVGTNAYCFAVWFTQNPTIVWMANRDQPVNGKRSKLSLLKTGNLLLQDADEFIVWSTDTSSSSSVELVLSNTGNLILRETDVGVRVPLWQSFDFPTDTLLPQQPLTRNTKLISSRSKSNHSSGFYNLFFDNDNVISLLYNGYEISSIYWPDPELGSLGAGRTTYNATRIAVLDSFGSFTSSDDLSFITSDYGTVLQRRLKVDSDGNIRVYSREDGTKEWHVSWQAISKPCTIHGICGANSICSYDPAGSGRKCSCVPGFKLKKGSDWSEGCEPTFHSSCNKSGIGSDFLRLPHVDFFGYDADFFPNYTLQECLKICLQSCDCKSIQYKYIIEDNQFNCYPKTMLLNGYRSTYFPGAIYLKLPASFKQDTLPEALVEGLNTSCNSSRTILLDRKYDKSHQNGKVKLLLWFAPCLGVLEIMCILLVWCFLVRTRRQSNAEAQGYLPVGTVFKKYGYSELKDASRGFTEEIGRGATGIVYKGEFPDHRVVAIKRLGGEAYQGGDDFLGEVSIIGRLNHMNLIKMWGYCAEGKHRLLIYEYMENGSLAENLVSDTLDFNRRFDIALGMARGLAYLHEECLEWILHCDVKPQNILLDSNFQPKVADFGLSKLLKRNDSRNWKFSHIRGTRGYMAPEWVYNLPITSKVDVYSYGIVVLEMVTGKSPAMGVQEVDGAEARHHWRLVTWVREKSIIGSSDASWLEEIVDPVIERKYDSDRLQILVEVALKCVEEDRDARPTMKRVVEMLQSHEND* 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01128 797 SMART blect_4 29 145 IPR001480 -
Rops10g01128 797 CDD PAN_AP_plant 325 412 - -
Rops10g01128 797 ProSiteProfiles EGF-like domain profile. 276 315 IPR000742 -
Rops10g01128 797 SUPERFAMILY Hairpin loop containing domain-like 336 380 - -
Rops10g01128 797 ProSiteProfiles Bulb-type lectin domain profile. 23 140 IPR001480 -
Rops10g01128 797 ProSitePatterns Protein kinases ATP-binding region signature. 518 540 IPR017441 GO:0005524
Rops10g01128 797 Gene3D - 19 144 IPR036426 -
Rops10g01128 797 SUPERFAMILY alpha-D-mannose-specific plant lectins 60 200 IPR036426 -
Rops10g01128 797 PIRSF SRK 1 797 IPR024171 GO:0004674
Rops10g01128 797 ProSitePatterns Serine/Threonine protein kinases active-site signature. 629 641 IPR008271 GO:0004672|GO:0006468
Rops10g01128 797 Pfam D-mannose binding lectin 68 160 IPR001480 -
Rops10g01128 797 CDD EGF 279 313 - -
Rops10g01128 797 Pfam Protein kinase domain 515 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g01128 797 ProSiteProfiles PAN/Apple domain profile. 329 407 IPR003609 -
Rops10g01128 797 SUPERFAMILY Protein kinase-like (PK-like) 497 791 IPR011009 -
Rops10g01128 797 Gene3D Phosphorylase Kinase; domain 1 478 587 - -
Rops10g01128 797 CDD STKc_IRAK 518 792 - -
Rops10g01128 797 FunFam S-receptor-like serine/threonine-protein kinase 481 587 - -
Rops10g01128 797 ProSiteProfiles Protein kinase domain profile. 512 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g01128 797 Gene3D Transferase(Phosphotransferase) domain 1 588 797 - -
Rops10g01128 797 FunFam Serine/threonine-protein kinase 588 797 - -
Rops10g01128 797 PANTHER OS07G0415500 PROTEIN 9 794 - -
Rops10g01128 797 SMART serkin_6 512 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g01128 797 Pfam S-locus glycoprotein domain 240 312 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01128 Rops-Chr10 23405012 23407405 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01128 440 792 Receptor kinase-like Gene Family AT5G45780 35.165 4.78e-59 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Rops10g01128 Pkinase 1.1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01128 - - jre:108987254 975.311