Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01094 ATGGGTCTTGGATTCATTTCAATTAGATACTCAAAGTGCTTTTCGCTTCTAAGCAAATCAAGTGAAGATCGCAAATCATCTGGAGTTGTTAAGTCCCCTAAGGCCAACAGTTTTGCTTTTGTGTTCACTAATAAGGGCCAGAAAGGAGTCAACCAGGATTGTCTTCTTGTTTGGGAGGAATTTGGTTGCCAACAAGACATGATGTTCTGTGGAGTTTTTTATGGGCATGGCCCTTGGGGTCACTTTGTAGCCAAAAGGGTCATGAAACTAGTACCAGCCTTTTTGCTATGCAATTGGCAGGAAAATCTGGCTACAACATCACTTGACCTGGATTTTAAGATGGAAACAGACCGAAATATCCATAGACTGGACATGTCGAAGCAATCCTACATAGAGACTTGTCTTCTTTGTTGA 414 0.4155 MGLGFISIRYSKCFSLLSKSSEDRKSSGVVKSPKANSFAFVFTNKGQKGVNQDCLLVWEEFGCQQDMMFCGVFYGHGPWGHFVAKRVMKLVPAFLLCNWQENLATTSLDLDFKMETDRNIHRLDMSKQSYIETCLLC* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01094 137 SUPERFAMILY PP2C-like 34 107 IPR036457 -
Rops10g01094 137 Gene3D - 27 136 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01094 Rops-Chr10 22698915 22699856 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01094 25 134 PP2C-type Phosphatase Gene Family AT5G27930 54.955 1.92e-41 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01094 - - gmx:100817397 201.445