Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01082 ATGGCCGTAGCAATAGGAAGAAGCTTCCCTTTTCAGCCACACTCTTTATTCAACAGTAAGACCATAAATAAACCATCAGCAGGAGGATACTCGTGGCTTGGAGCAGGAGCAGGAGCAGGAATCACCCCACGGTGTAGGCGAATTTGTGTAGCAGCACAACAGCGACCTACATGGCTCCCAGGACTTGAACCCCCACCTTATCTTGATGGAACTCTGGCTGGAGATTTTGGGTTCGACCCACTTGGGCTTGCAGAGGATCCTGAAAGCTTAAGGTGGTATGTGCAGGCAGAGCTGGTTCATTCTCGCTTTGCAATGCTTGGGGTCTTGGGAATTCTAGTGACAGATCTACTTCGTGTCACAGGACTTGGTAAGATACCAGTTTGGTTTGAAGCTGGTGCAGTAAAATACGAGTTCGCCAATACAGGAACGCTCTTCATTGTTCAACTACTTTTGATGGGGTTTGCTGAAACAAAAAGGTACATGGATTTCATTAGTCCTGGATCTCAAGCTAAAGAGGGGTCCTTCTTTGGATTGGAAGCCTCACTAGAAGGCTTAGAGCCAGGGTACCCTGGGGGTCCTCTGCTAAATCCTCTTGGCCTAGCTAAAGACATTAAAAATGCTCATGATTGGAAGCTCAAAGAGATCAAGAACGGGCGACTTGCAATGGTGGCGATGCTTGGCATCTTTGTACAAGCTTCAGTGACTCATGTTGGACCAATTGATAACCTTGTGGAGCATCTCTCAAATCCATGGCATAAAACAATTATTCAGACCCTTGCAAGTTCTGGTTCTTAG 795 0.4679 MAVAIGRSFPFQPHSLFNSKTINKPSAGGYSWLGAGAGAGITPRCRRICVAAQQRPTWLPGLEPPPYLDGTLAGDFGFDPLGLAEDPESLRWYVQAELVHSRFAMLGVLGILVTDLLRVTGLGKIPVWFEAGAVKYEFANTGTLFIVQLLLMGFAETKRYMDFISPGSQAKEGSFFGLEASLEGLEPGYPGGPLLNPLGLAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNLVEHLSNPWHKTIIQTLASSGS* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01082 264 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 52 259 IPR001344 GO:0009765|GO:0016020
Rops10g01082 264 FunFam Chlorophyll a-b binding protein, chloroplastic 56 263 - -
Rops10g01082 264 SUPERFAMILY Chlorophyll a-b binding protein 49 261 - -
Rops10g01082 264 Gene3D Chlorophyll a/b binding protein domain 57 263 - -
Rops10g01082 264 Pfam Chlorophyll A-B binding protein 64 232 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01082 Rops-Chr10 22594600 22596210 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01082 47 256 Chloroplast and Mitochondria Gene Families AT3G61470 47.867 5.71e-62 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01082 K08911 - gmx:100804934 436.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01082 10 22594600 22596210 Rops10g01082 10 22594600 22596210 ECH