Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01076 ATGTCTGGTCGGAGTGAACGCCAAACGGTTCCCCTTTCGGTGCTATTGAAGCGTGAATTGGCGAATGAGAAAATTGAGAAGTCGGAGGTTGTAGTGGTGCACGGCGTAGCTAGTGAGAACAAGAAAGGAGAGGATTTCACGTTAATAAAGACCGAATGCCAAAGGGTGTTGGGTGATGGGGTCTCTACGTATTATGTTTTTGGGCTATTCGATGGACACAATGGATCTGCTGCTGCTATTTATGCCAAGGAGAATCTTCTAAACAACGTTTTAAGTGCAATTCCTTCAAATCTTAACATAGATGAGTGGGTAGCAGCATTGCCTAGGGCTTTGGTTGCAGGCTTTGTAAAAACTGATAAAGATTTTCAACAGAAAGCAAAAACATCGGGAACAACCGTAACCTTTGTGATTATAGAAGGATTGGTTATAACAGTTGCATCAGTTGGTGATTCCCGGTGCATACTCGAACCTTCTGAAGGTGGCGTTTATTACTTGTCAGCAGATCATAGACTGGAAAGCAATGAAGAGGAGAGGGTGCGCATCACTTCTAGTGGGGGTGAGGTTGGTCGGCTGAATACAGGTGGAGGCACGCAGGTTGGTCCTTTGAGATGTTGGCCTGGCGGCTTGTGTCTCTCACGATCCATTGGTGACATGGATGTTGGTGAATTTATTGTCCCCGTACCATATGTAAAGCAAGTGAAGCTTTCCACTGCTGGAGGCAGGCTTATTATCAGCAGTGATGGTGTCTGGGATGCTCTAACTGCTGAAACGACCCTTGATTGTTGTCGTGGCATGTCAGCAGAGGCTGCAGCACCACATATTGTCAAAGAAGCTTTGCAAGCAACAGGACTTAGAGATGACACAACCTGCATTGTTATTGATATATCACCCCAGGAGAAGCCACCTACCTCTGTGCCAACACCAAAGAAACCGGTAAAAGGAATGCTTAAGTCCATTTTTCGCAAAAAGTCATCGGAATCCTCTTGTATTGACAAAGAATACATAGAGCCGGATGTGGTACGGGAACTATACGAGGAAGGATCTGCCATGCTTTCAGAGAGGTTAGAAACAAAATATCCACTCTGCAACATGTTCAAGTTGTTCATGTGTGCAGTATGTCAAGTAGAGATGCAACCAGGGGAGGGTATTTCAATATATGAGGGTGCGCCTAACGTAGGAAGATTGCGTCCCTGGGATGGACCTTTCCTTTGCTTAAGTTGCCAAGAGAAGAAAGAAGCCATGGAAGGGAAACAAACATCAGGTAGACTTAGCAGTGGAAGTGAGTAA 1287 0.4538 MSGRSERQTVPLSVLLKRELANEKIEKSEVVVVHGVASENKKGEDFTLIKTECQRVLGDGVSTYYVFGLFDGHNGSAAAIYAKENLLNNVLSAIPSNLNIDEWVAALPRALVAGFVKTDKDFQQKAKTSGTTVTFVIIEGLVITVASVGDSRCILEPSEGGVYYLSADHRLESNEEERVRITSSGGEVGRLNTGGGTQVGPLRCWPGGLCLSRSIGDMDVGEFIVPVPYVKQVKLSTAGGRLIISSDGVWDALTAETTLDCCRGMSAEAAAPHIVKEALQATGLRDDTTCIVIDISPQEKPPTSVPTPKKPVKGMLKSIFRKKSSESSCIDKEYIEPDVVRELYEEGSAMLSERLETKYPLCNMFKLFMCAVCQVEMQPGEGISIYEGAPNVGRLRPWDGPFLCLSCQEKKEAMEGKQTSGRLSSGSE* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01076 428 FunFam probable protein phosphatase 2C 12 34 301 - -
Rops10g01076 428 PANTHER PROTEIN PHOSPHATASE 34 294 IPR015655 GO:0004722|GO:0006470
Rops10g01076 428 SUPERFAMILY PP2C-like 37 297 IPR036457 -
Rops10g01076 428 CDD PP2Cc 40 295 IPR001932 -
Rops10g01076 428 Pfam Protein phosphatase 2C 59 280 IPR001932 -
Rops10g01076 428 SMART PP2C_4 23 293 IPR001932 -
Rops10g01076 428 SMART PP2C_SIG_2 41 295 IPR001932 -
Rops10g01076 428 Gene3D - 24 303 IPR036457 -
Rops10g01076 428 ProSiteProfiles PPM-type phosphatase domain profile. 33 295 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01076 Rops-Chr10 22541064 22550318 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01076 1 428 PP2C-type Phosphatase Gene Family AT1G47380 77.209 0.0 693
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01076 - - gmx:100796959 754.977