Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01063 ATGAAGCAGTGGTTAGGAGACATGAATCTCAATGTGATTCTGAGGATGATTGCTGGAAAGAGATACTCCACCAAAAGTGATGATGAGAAACAGGAGAACATCGACACAAGAGAGATTCGGGTGAGCGAGACTAAAGCAGAGCAAGACTTCATAGATGTCTTGCTGTCTGTCCTTGACGGAGTTGACCTTGAGGGTTATGATGCTGACACCGTCAACAAAGCCACATGCTTGACGCTAATTGCTGGGGCAACAGATACTACGACAGTCACTGTGACACGGGCACTCTCATTATTGTTGAATAATCGCCATGCTTTGAAGAAAGTTCAAGATGAACTGGATGAGTATGTGGGCAAGGAAAGACTAGTGAATGAATCAGACATTGACAACTTAGTTTACCTTCGAGCCGTGGACCCGTGGTTAAGGAGACACTGCGATTATATGCAGCTGGGCCACTTTCAGCTCCTCATGAATTCACAGAGGATTGTACCTTAG 492 0.4533 MKQWLGDMNLNVILRMIAGKRYSTKSDDEKQENIDTREIRVSETKAEQDFIDVLLSVLDGVDLEGYDADTVNKATCLTLIAGATDTTTVTVTRALSLLLNNRHALKKVQDELDEYVGKERLVNESDIDNLVYLRAVDPWLRRHCDYMQLGHFQLLMNSQRIVP* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01063 163 PANTHER CYTOCHROME P450 82C3-RELATED 1 33 - -
Rops10g01063 163 Gene3D Cytochrome P450 1 136 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g01063 163 Pfam Cytochrome P450 30 136 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g01063 163 SUPERFAMILY Cytochrome P450 2 136 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01063 Rops-Chr10 22360581 22362036 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01063 1 136 Cytochrome P450 AT4G31940 35.533 2.36e-29 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01063 - - pvu:PHAVU_002G161900g 139.043