Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01062 ATGAATTCCTCTTTGCAATTGACTATTATTGCCATCTTGGCCTCCTTGTTATTTCTTTTGTATGCTTTTCTGGGAAAGAAGAGGATCAATGGGGGTAGTAAGAGTAAAGAGGCTCCTGTAGCAGCTGGTGCTTGGCCAATTATTGGTCACCTCCACCTTTTGGGTGGTGATGATCAACTTCTCCATCAAACACTTGGAGCAATGGCTGATCAATATGGACCAGCATTCAATATATGGCTTGGTAGTCGACGAGCATTTGTGGTGAGTAGCTGGGAAGTGGCAAAGGAATGTTTCACAACTAATGACAAGGCACTTGCCTCACGTCCCACAACAGCTGCAACAAAGCATATGGGCTACAACTATGCAGTGTTTGGTTTTGCTCCTTATAGCCCCTTTTGGCGTGAAATGAGAAAGATTGCAACACTTGAACTTCTTTCCAACCGGAGGCTTGAAATGCTTAAGCATGTTAGAGTGTCTGAAATCAACATGGGTATAAAGGACCTTTACAACTCTTGGGTCCAAAATGGCTCACAGTCTGTGGTTGTAGAACTAAATCGATGGTTAGAGGATTTGACTATGAATATGGTGGTTAGAATGGTAGCAGGGAAACGTTATTTTGGTGCCTCAGCTACCTGTGATGATGGTGAAGCAAGGCGGGGCAAGCAAGCAATTAATCAGTTCTTTCATCTTATTGGCATTTTTGTGGTTTCAGATGCGCTTCCATTTTTGCGTTGGTTCGATGTGCAGGGTCATGAGAGGGCAATGAAGAGGACAGCCAAGGAGTTAGATGACATTCTTGAAGGCTGGTTAGAGGAGCATCGCAAGCAAAGAGTTAATGGTGAAGTTAAGGCAGAGGGTGAGCAGGACTTCATTGATGTGATGTTGTCGCTTCAGGAGGGAGGTCACCTATCAAATTTCCAATATGATGCGGAAACAAGCATCAAATCCACCTGCCTAGCTGTTATACTTGGTGGCAGTGATACCACAGCAAACACGCTTACTTGGGCCATCTCTTTACTCCTCAACAATCCGCAAGCACTGAAGAAGGCACAAGAAGAAGTGGACCTGAATGTTGGCATGGATCGACTAGTTGAAGAGTCAGACATAAGAAACCTTGTATATATTCAAGCCATTATCAAAGAAACCCTTAGGCTATACCCAGCTGGTCCCCTCCTAGGACCAAGAGAAGCCCAAGATGATTGTGAAGTTGCTGGTTATCATGTCCCTGCTGGCACCCGCTTGATTGTTAACTTATGGAAGATTCATAGGGATCCAAGGATTTGGGAAGACCCTTCTGCTTTTAGACCCGAGAGGTTTCTCTCTAGCCATGCACTTGATGTTAAAGGCCAAAACTTTGAACTCATTCCATTTGGCTCCGGTAGACGATCATGTCCTGGCATGTCGTTTGCACTCGTGGTTCTTCATTTGACACTTGCTCGTTTGCTTCATGCATTTGAATTCGCAAACCCATCAAAGAAACCAGTTGACATGACTGAGAGTCCTGGTTTAACCATTCCTAAGGCAACTCCATTAGAGGTTCTCCTTACTCCTCGCCTTCCAGCACAATTATATGCCTAA 1578 0.4461 MNSSLQLTIIAILASLLFLLYAFLGKKRINGGSKSKEAPVAAGAWPIIGHLHLLGGDDQLLHQTLGAMADQYGPAFNIWLGSRRAFVVSSWEVAKECFTTNDKALASRPTTAATKHMGYNYAVFGFAPYSPFWREMRKIATLELLSNRRLEMLKHVRVSEINMGIKDLYNSWVQNGSQSVVVELNRWLEDLTMNMVVRMVAGKRYFGASATCDDGEARRGKQAINQFFHLIGIFVVSDALPFLRWFDVQGHERAMKRTAKELDDILEGWLEEHRKQRVNGEVKAEGEQDFIDVMLSLQEGGHLSNFQYDAETSIKSTCLAVILGGSDTTANTLTWAISLLLNNPQALKKAQEEVDLNVGMDRLVEESDIRNLVYIQAIIKETLRLYPAGPLLGPREAQDDCEVAGYHVPAGTRLIVNLWKIHRDPRIWEDPSAFRPERFLSSHALDVKGQNFELIPFGSGRRSCPGMSFALVVLHLTLARLLHAFEFANPSKKPVDMTESPGLTIPKATPLEVLLTPRLPAQLYA* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01062 525 Pfam Cytochrome P450 44 507 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g01062 525 PANTHER CYTOCHROME P450 82C3-RELATED 16 524 - -
Rops10g01062 525 PRINTS P450 superfamily signature 324 341 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g01062 525 PRINTS P450 superfamily signature 464 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g01062 525 PRINTS P450 superfamily signature 377 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g01062 525 PRINTS P450 superfamily signature 455 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g01062 525 Gene3D Cytochrome P450 30 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g01062 525 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 457 466 IPR017972 GO:0005506|GO:0016705
Rops10g01062 525 SUPERFAMILY Cytochrome P450 44 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g01062 525 CDD CYP82 73 518 - -
Rops10g01062 525 PRINTS E-class P450 group I signature 93 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g01062 525 PRINTS E-class P450 group I signature 313 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g01062 525 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g01062 525 PRINTS E-class P450 group I signature 191 209 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g01062 525 PRINTS E-class P450 group I signature 333 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g01062 525 PRINTS E-class P450 group I signature 376 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g01062 525 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g01062 525 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g01062 525 PRINTS E-class P450 group I signature 417 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g01062 525 FunFam Cytochrome P450 82C4 28 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01062 Rops-Chr10 22343443 22345632 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01062 19 524 Cytochrome P450 AT4G31940 67.383 0.0 720
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01062 K23136 - gmx:100811993 872.078