Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01048 ATGCAGAAACATATGGAAGCCAGTTGCAGTCGAGTTTTGGCACAAGGAATTGTATTCCTTGTGATTGCATCACTGGCTTTGGGGAGCGAGGGCAGAAGAAACATCTTGGTTGGAGACTCTGAAGGTTGGCGTACAGGCACTAACTACACCGAATGGGCCATCCAAAATAGCCCCTTCCAAATAAATGACACACTGGTTTTCAAGTATCCCCCACCAGGCAATTCCACGGTTGCTCAGAGTGTCTACTTATTACCAGACATGTGGAGCTACATGACATGCGAATTCAGGGGTGCAAAGCTGTTGGGAAGTGCAACTCATGGAACTGGTGAGGGTTTGAAAGTTGAGCTCAATCAGAGGAAGCCTTACTATTTTGCCTCTGCTGAAGGCAATGCCTATGACTGCATTGCTGGCCTCGCCAAATTCATTGCTGTCCCATCTACACATTCTACTTAG 453 0.4724 MQKHMEASCSRVLAQGIVFLVIASLALGSEGRRNILVGDSEGWRTGTNYTEWAIQNSPFQINDTLVFKYPPPGNSTVAQSVYLLPDMWSYMTCEFRGAKLLGSATHGTGEGLKVELNQRKPYYFASAEGNAYDCIAGLAKFIAVPSTHST* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01048 150 Pfam Plastocyanin-like domain 43 129 IPR003245 GO:0009055
Rops10g01048 150 PANTHER GLYCINE-RICH PROTEIN-LIKE 31 148 - -
Rops10g01048 150 SUPERFAMILY Cupredoxins 34 144 IPR008972 -
Rops10g01048 150 ProSiteProfiles Phytocyanin domain profile. 33 147 IPR003245 GO:0009055
Rops10g01048 150 Gene3D - 32 146 IPR008972 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01048 6 148 Phytocyanin Superfamily AT1G79800 28.378 1.22e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01048 - - lang:109342628 214.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01048 10 22177380 22178222 Rops10g01048 10 22177380 22178222 ECH