Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01033 ATGGCTGCCATGAACTGTAATGTATTGGCTTCTAGCTATGCCATATCAGGTACAGGATCTTCTGAGCTCAATGCCAAGCTCATTTCAGTTGCTTCACCAGTGGTCTCTGGTTACAAGTTGAAGTTGCCTATGATCAAGGCCCAGAAGGCTAGAGTTCCTGAAGCTAAAGAAAGTGAAGGAAGGAGAGGTGCCCTTGTTTTATTGGCAGCTACACTTTTCACCACTGCAGCTGCAGCCTCTGCTAATGCTTCAGTCTTTGATGAATACCTAGAAAGGAGCAAGGCCAACAAGGAATTGAATGACCAGAAGAGGCTAGCTACTAGTGGAGCAAACTTTGCAAGAGCATACACTGTGCAATTTGGCACTTGCAAGTTCCCTGAGAACTTCACTGGTTGCCAAGATCTTGCCAAACAAAAGAAAGTGCCATTCCTTTCTGATGATTTGGAACTTGAATGTGAAGGAAAGGACAAATACAAGTGTGGTTCTAATGTTTTCTGGAAATGGTGA 507 0.4398 MAAMNCNVLASSYAISGTGSSELNAKLISVASPVVSGYKLKLPMIKAQKARVPEAKESEGRRGALVLLAATLFTTAAAASANASVFDEYLERSKANKELNDQKRLATSGANFARAYTVQFGTCKFPENFTGCQDLAKQKKVPFLSDDLELECEGKDKYKCGSNVFWKW* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01033 168 FunFam Photosystem I reaction center subunit N 84 168 - -
Rops10g01033 168 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT N, CHLOROPLASTIC 1 168 IPR008796 GO:0009522|GO:0015979
Rops10g01033 168 Pfam Photosystem I reaction centre subunit N (PSAN or PSI-N) 44 168 IPR008796 GO:0009522|GO:0015979
Rops10g01033 168 Gene3D - 84 168 IPR044907 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01033 Rops-Chr10 21928443 21929265 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01033 1 139 Calmodulin-binding Proteins AT5G64040 69.014 3.91e-61 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01033 K02701 - tcc:18611871 256.144