Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00952 ATGAAAAGCCTATGTCTTGGGCTGTTCTTTACTGGCAGTGCCCCAGTTCGCAGAAGAGCCTTTGCAGACCATTTAACTAGAAAGAGCTTTGGAAAGCAACTTCAATTCTACTCTCCCTGCCTTGTTTTCTCTTCATACTCAAGTTCTTCAACTATATCAGTAATAGAAGATGTAGAAGAGAAGCCTATATTTGATGGAGAGAAGGCTGCCTTGCTTGTTAAGGTGCTTAGAAAGAACTTTGATTCAGGCAAGACAAAAAGCTATAAATGGAGGATTTCCCAGTTGGAGGCCATAGCTAAGATGCTAGAAGAGAGGGAGAAGGACATTATTACAGCACTTGACAAGGACCTTTCTAAACCTGAATTAGAAACATTTTTATCTGAGGTGTCTCAGACAAAATCCTCATGTAGTGAAGCGCTCAAAGAACTGAAGCACTGGATGAAGCCTGAAAAGGTAAAAACTTCAATTACAACATATCCATCATCAGCAGAGATTGTGTCAGAACCACTGGGAGTTGTGTTGGTCATCTCAACATGGAACTATCCTTTCTTGTTATCACTTGATCCAGTCATTGGAGCAATTTCAGCAGGTAATACAGTGGTTCTGAAACCATCAGAAATTGCTCCAGCAACATCATCACTACTTGCAAATTTGATCAAAAATTATCTAGACAACTCTGCCATAAGAGTTATTGAAGGGGCTGTTCCTGAAACAACTGCCCTCTTGGAGCAGAAGTGGGATAAGATACTATACACGGGTAGTGCTAGAATAGGCCGCATTGTCATGGCTGCTGCTGCAAAACACCTTACCCCAGTAATTCTAGAACTTGGAGGAAAGTGCCCAGCTGTTGTTGATTCAAATATCAACTTACAGGTTACTGCTAGGAGGATAATAGCTGGAAAGTGGGCATGCAATAGTGGACAAGCATGCATTTCTGTTGATTATATCATCACAAAAAAAGAATTTGCTCCAACACTAATAAATGCTCTAAAAGAGGAATTGGAGCAATTTTTTGGAAAAGATCCAATGGAATCAAAAGACATGTCACGTATTGTATCTCCATACCACTTTTCTCGGCTCGTGAAGCTCTTGGATGAGGATAAGGTATCTGAAAAAATTGTTTTAGGAGGTCAGAAGGATGAGGAGAAATTAAAGATTGCTCCAACCATCATATTGGATGCTCCAGAAGATTCTATCGTAATGCAAGAAGAGATATTTGGGCCAATAATGCCAATTGTCACAGTTGACAACATAGAAGATAGCTTTAGTATAATCAAATCAAAGCCAAAACCTCTTGCTGCATATCTCTTCACAAACAATGAGCAGCTGAAGAAGGATTATGTGGAAAACATATCTTCTGGAGGGATGCTCATCAATGACACTATCTTACATGTTGCAACTCGTGGTTTACCATTTGGAGGAGTTGAAGAGAGTGGAATGGGTTGTTACCATGGAAAATTCTCCTTTGATGCTTTTAGTCATAAGAAGTCAGTTCTGTATAGAAGTTTTGATGCAGATTCATCCTTGAGGGTGTCCTTTCTACATGTGCTAGCTAGGCCAGATGCTCATGTTGCAATAAGGGACACCCTCTGA 1593 0.4018 MKSLCLGLFFTGSAPVRRRAFADHLTRKSFGKQLQFYSPCLVFSSYSSSSTISVIEDVEEKPIFDGEKAALLVKVLRKNFDSGKTKSYKWRISQLEAIAKMLEEREKDIITALDKDLSKPELETFLSEVSQTKSSCSEALKELKHWMKPEKVKTSITTYPSSAEIVSEPLGVVLVISTWNYPFLLSLDPVIGAISAGNTVVLKPSEIAPATSSLLANLIKNYLDNSAIRVIEGAVPETTALLEQKWDKILYTGSARIGRIVMAAAAKHLTPVILELGGKCPAVVDSNINLQVTARRIIAGKWACNSGQACISVDYIITKKEFAPTLINALKEELEQFFGKDPMESKDMSRIVSPYHFSRLVKLLDEDKVSEKIVLGGQKDEEKLKIAPTIILDAPEDSIVMQEEIFGPIMPIVTVDNIEDSFSIIKSKPKPLAAYLFTNNEQLKKDYVENISSGGMLINDTILHVATRGLPFGGVEESGMGCYHGKFSFDAFSHKKSVLYRSFDADSSLRVSFLHVLARPDAHVAIRDTL* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00952 530 FunFam Aldehyde dehydrogenase 278 478 - -
Rops10g00952 530 FunFam Aldehyde dehydrogenase 77 281 - -
Rops10g00952 530 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 77 496 IPR016162 GO:0016491
Rops10g00952 530 SUPERFAMILY ALDH-like 72 504 IPR016161 GO:0016491
Rops10g00952 530 Pfam Aldehyde dehydrogenase family 67 498 IPR015590 GO:0016491
Rops10g00952 530 PIRSF ALDH 46 524 IPR012394 GO:0006081
Rops10g00952 530 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 278 478 IPR016163 GO:0016620
Rops10g00952 530 PANTHER ALDEHYDE DEHYDROGENASE 69 510 IPR012394 GO:0006081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00952 Rops-Chr10 20755002 20760708 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00952 41 510 Aldehyde Dehydrogenase Gene Family AT4G34240 67.660 0.0 657
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00952 K00128 - gmx:100800699 842.417