Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00946 ATGCCGTCGATCCGCCGGAGGAGAAGAGATGTCGTCGTGCCGCTGAGCGTCAGTGAACCCGCGTACAGGTTGTCACCAAAACATCCTCTCCTTGCTGGTTACGATGATTGTTGGGCTTCTCTCCAATGGGTTGCATCCCATTCTACCAAAAACACCATCAACACAAAGCCATGTTTGATTGACTATGGTGACTTCAACAAAGCTTTCATAGGAGGCGACAATGTAGGTGGTAATATTGTTCATAACATTGTCATGTGTGCTGAGACTGAGGCATTGCCTGGGCTCAAGCAAAGCTTTTTCAATTTGGTTTGGAAATTGGTGTACCCATCAGTGCCGGGTGGGATTGATAATCCCAAGATTAACCATTTTTCTCCTGGGGTACCTAGCTTGACTGTACTTGCATGCTCTTCCATTATTGTGTTTGTTGCTGGCAAGGATGGTTTAAGGCACAGAGGCGTTTCCTATTACGAGGTTGTGAAGAAAAGTGGATAG 492 0.4634 MPSIRRRRRDVVVPLSVSEPAYRLSPKHPLLAGYDDCWASLQWVASHSTKNTINTKPCLIDYGDFNKAFIGGDNVGGNIVHNIVMCAETEALPGLKQSFFNLVWKLVYPSVPGGIDNPKINHFSPGVPSLTVLACSSIIVFVAGKDGLRHRGVSYYEVVKKSG* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00946 163 PANTHER ARYLACETAMIDE DEACETYLASE 15 163 - -
Rops10g00946 163 Pfam alpha/beta hydrolase fold 17 94 IPR013094 GO:0016787
Rops10g00946 163 SUPERFAMILY alpha/beta-Hydrolases 20 162 IPR029058 -
Rops10g00946 163 Gene3D alpha/beta hydrolase 8 163 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00946 Rops-Chr10 20666775 20676027 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00946 22 162 Carbohydrate Esterase AT3G48700 30.636 5.35e-21 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00946 - K13258 aprc:113873855 189.889