Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00937 ATGCACGAGGACAAGAAGATGAAGGTGAAGAAGGGTTGGCTTGCTGTTCAAGTGGGTTTAGAAGACGAACAAGAAGGTGGTTCTGCCTCTCAAAAATTCGTGATCCCTATCTCATATCTTTACCATCCTCTTTTCAAGCGTCTTCTAGACAAAGCTTACGACGTTTATGGTTACCACACCGACGGTCCTCTCAAGCTTCCTTGTTCTGTCGATGATTTCCTTCATCTACGTTGGAGAATCGAGAAAGAGTCAAGTCCTCATCACCACCACCACAACCATCACCATCATCGCCTTCCTCATGCTTTGAACTTCCACTCTTGTTAA 324 0.4506 MHEDKKMKVKKGWLAVQVGLEDEQEGGSASQKFVIPISYLYHPLFKRLLDKAYDVYGYHTDGPLKLPCSVDDFLHLRWRIEKESSPHHHHHNHHHHRLPHALNFHSC* 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00937 107 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 5 76 IPR003676 GO:0009733
Rops10g00937 107 Pfam Auxin responsive protein 6 79 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00937 Rops-Chr10 20568066 20568787 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00937 9 81 Calmodulin-binding Proteins AT3G43120 43.836 2.52e-12 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00937 K14488 - gmx:100809305 189.119