Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00912 ATGTTACGAACGTTCCCAAGCTGCAACCTCGAACGTTCCCAAGCTGCAACCTTTCGTTTGAGGAGCGAACGTTCCCAAGCTGCAACCTCGAAACCCCTATTTGTTGGACCAGAACCAGAAGCCGCAACTTCCACAAAGTTGCCCTCAACTACCTTCATATATATATATAGGACTTCAACGGTTATAGACATAGGTGAAGAAGATATTGTAGGTGGCATTATGGACAAGGCACGATTTGGGCTCTTCTTCATGTTGCTTATTCTCCTAGCTTCTCAAATGGTGGTGCAAACCGAGGGAAGGCACTGTGAGTCAAAGAGTCACCGTTTTAAAGGGATGTGTCTCAGCCATCACAACTGTGCTTCGGTTTGTCATCTCGAAGGTTTCATAGGTGGTAAGTGCTTGGGATTCCGTAGACGCTGCTTCTGCACCAAGCATTGTTAG 441 0.4671 MLRTFPSCNLERSQAATFRLRSERSQAATSKPLFVGPEPEAATSTKLPSTTFIYIYRTSTVIDIGEEDIVGGIMDKARFGLFFMLLILLASQMVVQTEGRHCESKSHRFKGMCLSHHNCASVCHLEGFIGGKCLGFRRRCFCTKHC* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00912 146 CDD Knot1 113 143 IPR003614 GO:0006952
Rops10g00912 146 PANTHER DEFENSIN-LIKE PROTEIN 1 79 146 - -
Rops10g00912 146 SMART gth_4 101 146 IPR003614 GO:0006952
Rops10g00912 146 ProSitePatterns Gamma-thionins family signature. 100 123 IPR008176 GO:0006952
Rops10g00912 146 PRINTS Purothionin signature 101 116 IPR008176 GO:0006952
Rops10g00912 146 PRINTS Purothionin signature 131 145 IPR008176 GO:0006952
Rops10g00912 146 Gene3D - 100 146 IPR036574 -
Rops10g00912 146 Pfam Gamma-thionin family 100 146 - -
Rops10g00912 146 SUPERFAMILY Scorpion toxin-like 100 146 IPR036574 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00912 Rops-Chr10 20245422 20248503 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00912 74 146 Plant Defensins Gene Families AT5G63660 57.534 3.21e-25 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00912 - - gmx:100788332 150.984