Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00904 ATGGAACATTGGGGTGTTAATCATAGAATCATGTTTATTGGTCAACAGCATGAGGAGGATGGAAGTCAACTTCCTTCTGATTTTTCTAAGGAAGAGGAATCAAATGATGAAGAAGAAAAAATCATTAAAACTGAACCTGCCTTCATACCAGAAATTAAGAAAAGGAAGCGCCTTAGCCTTAGTCAGCTAAGAGAGGTAAAAGAGGAGTCGTGTGGGAGGCAAAGCAAAAGCAAGCATAAGACGAAGAAGCATGAAAGTAGGGACAGATGGTCAGCCGAGAGGTACAAGTTGGCTGAGCAAAACATGTGGGAGGTGTTAAAGGCTGAAGGTGCAACTTTTCAAAACCCAATAACCCGACCTTCACTAAGAATGGCTGCCCGCAAACACATTGGTGATACTGGACTTTTAGACCACTTATTGAAGCACATAGATGGTAAAGTGGCACCGGGAGGGACTGAGCGGTTCCGAAGATGGTTCAACACCAACGGAATCATGGAGTATTGGTTGGAGAGTGCTGACTTGGACAAGCTCCGCCAGGAGGCAGGGGTGCAGGACCCTTACTGGGTACCACCATCTACTGTTAGGGCAGGCAGTGCGTCCTCTCAGAATACTGATTCTTCTGGTGAATTGAAACAGCTTAAAATAGAAATGGCCCAAATGAAAAAAGATATGCAGGAGCTCATTGCCAACAAACAAGGGAAAAATGAAAATAGTATGATGGAGGAGAATCACAAGGAATTTGTGAAATGGAAAGCAATGACCGACCGTCGCCTAACTGACATCATGTCTTCTTTGAAGGGTGTACAGGGCAAGCATGGTGAATTGGTGATTTGGAAAACTAAAGTTGATCAACAGCTTGTGGAAATAACAAATAAATTGAATGATCTCCAAGCATCGAGGGAATGCACCACTTTTAGTCCTCCTTCAGAAAGATGGAAAGATTGGATAGAGAGCACTAACCTAGACAATATACAGGAAGATGCATTTGCAACTTGGATTGGGAGTTCAGAGCTACTTAATGTTCCACAAGAGGTTGTACTTGAAGATCCCAACTCAGCCATACCAACTCAGCTACTCAATGAAGGACTGACTAACAAGAAGAGTGATGTGCTGGAGTTGGCGCCTGCGAGGCAAGAAGATCAACCTAATGTGACCCCTGATTCTTCTACAACTGTTAATTCAAAGTCAGACATCGACAACTCATTGGTGATGTTTCAGGAGATGTTTATGGATTTATTCAAATGGAAAGACAAAATAGAGCAGCAGCTGTTGGAGGTCTCAAACACTGTATATGGTATGCTGGCAATGAAGTAG 1314 0.4315 MEHWGVNHRIMFIGQQHEEDGSQLPSDFSKEEESNDEEEKIIKTEPAFIPEIKKRKRLSLSQLREVKEESCGRQSKSKHKTKKHESRDRWSAERYKLAEQNMWEVLKAEGATFQNPITRPSLRMAARKHIGDTGLLDHLLKHIDGKVAPGGTERFRRWFNTNGIMEYWLESADLDKLRQEAGVQDPYWVPPSTVRAGSASSQNTDSSGELKQLKIEMAQMKKDMQELIANKQGKNENSMMEENHKEFVKWKAMTDRRLTDIMSSLKGVQGKHGELVIWKTKVDQQLVEITNKLNDLQASRECTTFSPPSERWKDWIESTNLDNIQEDAFATWIGSSELLNVPQEVVLEDPNSAIPTQLLNEGLTNKKSDVLELAPARQEDQPNVTPDSSTTVNSKSDIDNSLVMFQEMFMDLFKWKDKIEQQLLEVSNTVYGMLAMK* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00904 437 MobiDBLite consensus disorder prediction 63 89 - -
Rops10g00904 437 MobiDBLite consensus disorder prediction 23 46 - -
Rops10g00904 437 Coils Coil 279 299 - -
Rops10g00904 437 MobiDBLite consensus disorder prediction 13 46 - -
Rops10g00904 437 Coils Coil 203 237 - -
Rops10g00904 437 PANTHER PROTEIN DYAD 1 435 IPR044221 GO:0007131|GO:0051177|GO:0051321
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00904 Rops-Chr10 20100563 20104078 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00904 89 224 PHD Transcription Factor Family AT5G22260 33.571 6.95e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00904 - - gmx:100806484 717.998