Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops10g00901 | ATGTCCAAATCCAACACTGCTACCACCACCACAACGGTTCCACCCAAAACCACTTGGGTTCTCCCTTATAGAACCGAGAACTTGAAGGAAGTTTACACCTTGGGGAGAAAACTGGGTCAGGGTCAATTTGGAACCACATATCTTAGCAGACACAACTCAACGGGTCGTACCTATGCGTGCAAGTCAATCCCAAAGAGGAAGCTTTTGTGCAAAGAGGACTATGATGATGTTTGGAGGGAGATTCAGATAATGCACCATTTGTCTGAGCACCCCAATGTTGTGAGGATCCATGGAACCTATGAGGATTCTTCTTCTGTTCACTTGGTTATGGAGCTATGTGAAGGTGGTGAGTTGTTTGATAGGATTGTGCAGAAGGGGCATTATAGTGAGAGAGAAGCTGCAAAGTTGATAAAGACTATTGTTGAGGTTGTGGAGGCTTGTCATTCTCTTGGGGTCATGCATAGAGACCTTAAACCTGAGAACTTTTTGTTTGATACTGTTGAAGAAGATGCTAAACTCAAAGCCACTGATTTTGGGTTGTCTGTTTTTTACAAGCCAGGTGAAACCTTTTCTGATGTTGTTGGAAGCCCATACTATGTTGCACCAGAGGTCTTGCGCAAGCATTATGGACCTGAAGCAGACGTCTGGAGTGCTGGGGTTATTCTGTACATCTTATTAAGTGGGGTGCCACCATTTTGGGCTGAAACTGAGCAGGGGATCTTCCGCCAGATTTTGCTGGGAAGACTTGATTTCCAGTCCGAGCCATGGCCAAGCATTTCAGACAGTGCCAAGGATCTAATTCGGAAAATGCTTGATCGGAATCCAAAAACAAGGCCTACAGCTCACAAAGTACTCTGCCACCCATGGATTGTTGATGACAATATTGCACCAGATAAACCTCTTGATTCTGCAGTTTTGTCACGTCTGAAGCAATTCTCTGCAATGAATAAACTTAAAAAGATGGCTTTGCGGGTTATTGCGGAGAGTCTCTCTGATGAAGAAATTGGTGGTCTGAAGGAGTTATTCAATATGATTGATGCTGACAACAGTGGAACTATAACATTTGATGAGCTAAAAGAAGGCTTAAAGCGAGTAGGATCTGAACTTATGGAGTCTGAAATAAAGGATCTTATGGATGCAGCAGATATTGATAATAGTGGGACAATTGACTATGGGGAATTCATTGCTGCGACGGTGCACCTAAATAAACTGGAGAGAGAGGAAAATCTGTTGTCAGCATTCTCCTATTTTGACAAAGATGGAAGTGGTTACATAACCATTGATGAGATACAACAAGCTTGTAAGGATTTTGGTTTGGATGATGTCCATATTGATGAAATGGTCAAGGAAATTGATCAAGACAATGATGGACAAATAGATTATGGGGAATTTGCTGCCATGATGAGAAAGGGCAATGGAGGGATTGGAAGGCGAACCATGAGAAGCACACTCAATTTCAGAGATGCTCTGGGAATCATAGGCAATGGATCCAATGAAGTCATACCTTAA | 1509 | 0.4274 | MSKSNTATTTTTVPPKTTWVLPYRTENLKEVYTLGRKLGQGQFGTTYLSRHNSTGRTYACKSIPKRKLLCKEDYDDVWREIQIMHHLSEHPNVVRIHGTYEDSSSVHLVMELCEGGELFDRIVQKGHYSEREAAKLIKTIVEVVEACHSLGVMHRDLKPENFLFDTVEEDAKLKATDFGLSVFYKPGETFSDVVGSPYYVAPEVLRKHYGPEADVWSAGVILYILLSGVPPFWAETEQGIFRQILLGRLDFQSEPWPSISDSAKDLIRKMLDRNPKTRPTAHKVLCHPWIVDDNIAPDKPLDSAVLSRLKQFSAMNKLKKMALRVIAESLSDEEIGGLKELFNMIDADNSGTITFDELKEGLKRVGSELMESEIKDLMDAADIDNSGTIDYGEFIAATVHLNKLEREENLLSAFSYFDKDGSGYITIDEIQQACKDFGLDDVHIDEMVKEIDQDNDGQIDYGEFAAMMRKGNGGIGRRTMRSTLNFRDALGIIGNGSNEVIP* | 503 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops10g00901 | 502 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 25 | 464 | - | - | |
Rops10g00901 | 502 | Gene3D | - | 403 | 501 | - | - | |
Rops10g00901 | 502 | ProSitePatterns | EF-hand calcium-binding domain. | 418 | 430 | IPR018247 | - | |
Rops10g00901 | 502 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 369 | 404 | IPR002048 | GO:0005509 | |
Rops10g00901 | 502 | Gene3D | Phosphorylase Kinase; domain 1 | 34 | 118 | - | - | |
Rops10g00901 | 502 | Gene3D | - | 331 | 402 | - | - | |
Rops10g00901 | 502 | ProSitePatterns | EF-hand calcium-binding domain. | 346 | 358 | IPR018247 | - | |
Rops10g00901 | 502 | Pfam | Protein kinase domain | 32 | 290 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops10g00901 | 502 | ProSitePatterns | Protein kinases ATP-binding region signature. | 38 | 61 | IPR017441 | GO:0005524 | |
Rops10g00901 | 502 | FunFam | CDPK-related kinase 3 | 24 | 192 | - | - | |
Rops10g00901 | 502 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 152 | 164 | IPR008271 | GO:0004672|GO:0006468 | |
Rops10g00901 | 502 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 333 | 368 | IPR002048 | GO:0005509 | |
Rops10g00901 | 502 | FunFam | Calcium-dependent protein kinase SK5 | 403 | 498 | - | - | |
Rops10g00901 | 502 | ProSitePatterns | EF-hand calcium-binding domain. | 452 | 464 | IPR018247 | - | |
Rops10g00901 | 502 | CDD | STKc_CAMK | 31 | 289 | - | - | |
Rops10g00901 | 502 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 405 | 440 | IPR002048 | GO:0005509 | |
Rops10g00901 | 502 | FunFam | calcium-dependent protein kinase SK5 | 327 | 399 | - | - | |
Rops10g00901 | 502 | ProSitePatterns | EF-hand calcium-binding domain. | 382 | 394 | IPR018247 | - | |
Rops10g00901 | 502 | FunFam | Calcium-dependent protein kinase SK5 | 200 | 295 | - | - | |
Rops10g00901 | 502 | SUPERFAMILY | EF-hand | 330 | 470 | IPR011992 | - | |
Rops10g00901 | 502 | Gene3D | Transferase(Phosphotransferase) domain 1 | 119 | 330 | - | - | |
Rops10g00901 | 502 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 443 | 474 | IPR002048 | GO:0005509 | |
Rops10g00901 | 502 | CDD | EFh | 338 | 397 | IPR002048 | GO:0005509 | |
Rops10g00901 | 502 | ProSiteProfiles | Protein kinase domain profile. | 32 | 290 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops10g00901 | 502 | SUPERFAMILY | Protein kinase-like (PK-like) | 11 | 313 | IPR011009 | - | |
Rops10g00901 | 502 | Pfam | EF-hand domain pair | 408 | 469 | IPR002048 | GO:0005509 | |
Rops10g00901 | 502 | SMART | serkin_6 | 32 | 290 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops10g00901 | 502 | Pfam | EF-hand domain pair | 350 | 400 | IPR002048 | GO:0005509 | |
Rops10g00901 | 502 | SMART | efh_1 | 373 | 401 | IPR002048 | GO:0005509 | |
Rops10g00901 | 502 | SMART | efh_1 | 409 | 437 | IPR002048 | GO:0005509 | |
Rops10g00901 | 502 | SMART | efh_1 | 443 | 471 | IPR002048 | GO:0005509 | |
Rops10g00901 | 502 | SMART | efh_1 | 337 | 365 | IPR002048 | GO:0005509 | |
Rops10g00901 | 502 | FunFam | Calcium-dependent protein kinase 1 | 34 | 117 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops10g00901 | Rops-Chr10 | 20058202 | 20063842 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops10g00901 | 20 | 499 | EF-hand Containing Proteins | AT1G35670 | 78.054 | 0.0 | 787 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CAMK_CDPK | Rops10g00901 | Pkinase | 2.3e-78 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops10g00901 | K13412 | - | gmx:100790443 | 937.176 |