Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00859 ATGCAGCCTCATATAGCTGCCAATGAGACATTATTCTCATATGTTACTTTAATCAATTCAACAGACTACAACATTGCAGACTTTAATGTTTGCCTTTCTCTTCCACCCCACATTATCTCAGATGGCATATGGGGAGGACACGGGACAGAAATGTCGCCATCAAAGTCATCTTTCCCAGTGTTCCTTCTACAATTCATTGTGATTTATGCTACAGCACGTGCTTTACATTTCCCTGTCAAGAAGTTGGGTTTACCCTTTTTCATTTCACAAATGATAGGTGGGCTGATTCTAGGACCAACGTGGTCTGGGTTGGAGGGAACCCTGAGGACGTTGTTTCCTTATGGAAGTCAAGATACACTTGCAACAATAACAGCATTTGGTTTTGTATTATTCCTCTTTGAGACTGGTGTAAAAATGGATTACAGCGTGATCATAAGAACAGGAAGAAAGGGATGGATCATTGCCTTGTTAGGATTGATAACACCTTTGCTCGTTGGTTTTGCATCTCAAAACTTCATCCCTTCATTTTTTGGTAGTGTTTCTGAGAAGCAAACTGAAACCAACTTGATAATGATAGTGCACACTACAACTTCATTTGCAGTGATTGCTTCTGTCCTCAATGAACTTCAACTCCTAAACTCTGAACTTGGCAGACTTACATTATCTTGTGCATTGGTGGGTGACATATTGAGTAACATTCTTATAACTCTTGCCTCAACCTTTCAGTATGGTAGCGTGTTTAGAATTGGAATGATAAGGTTGGGAACTTTATTGTTCCTGGTTCTCTTCATTTTGTTTGTCTATCGTCCTGCAATGTTTTGGGTCATTGAACACACACCAGAAGGAAAAGAAGTTCAGGATATTTACATCAGCATTATCATTGGGATTCTTTTTTCCTTGTGTTGGTTTTCAATAGTCTTGGAAAACGGATCCATGACTCTACCTTTTATTTTTGGATTGGCTACACCAGAAGGAACTCCATTAGGATCCACATTGATTCAAAGGATTCATTTGTTAGGTAGGAAATTGCTTTTGCCAATCTTCTTGACTACATGTGCAATGAAAGTACAAGTTCAATCCTTGGCATTTTCAACACCAACATTGACAACTGCTGCCTTCATTTTCCTTATGGGTTATCTAATCAAATTTGCAACATGCTTGGTATCTTCATTCTTTTTCAAAATACCCTTGAAGGATGGTTTGGCTCTTGCCCTCATTTTGAGCAGCAAAGGTATTGTGGAAATTATCATGTGCTCTACGGCATTGGACAGACAAGATCTCCAACCCAAGAACTATTCGATAATTATCGTGATAATCGTGATTGCAAGTATCATTACGCACATGTTGGTGACATATTTGTATGATCCTTCAAGGAAATATGCTGGCTACCAAAAAAGGAACCTTTTTAGTTTGAAGCCCAACTCAGATCTTAAGATACTGGTTTGCATTCATAAACAACATCACATAACTCCTATCATTAGAGTTCTTGATCTGTGTTATCCTACAACAAAAGATCCTATCATGGTAGAAGCTTTGCACTTAATCAAGTTAATTGGACGAACCTCGCCCATTTTCATTTCTCACAAGAAGAAGAAAATTGATGTCTCAAACTTGCAAAACTCTTACTCTGAGAATGTCATTCTTACTTTCAAACTATATGAAGATGACAAACAAGGTGCAGCATCAATAAACCCCTACACGGCTTTATCACCACCTAATTTAATGTATGAAGATGTGTGTGACCTTGCATTGGACAGAGTTGCATCCATTATAATTCTTCCTTTTCATAGAAAATGGTCCCCTTGTGGCAGAATTGAATATGAGGACAAGAACATGAGAGCTTTAAACTGTATGGTTTTGGAAAGGGCTCCATGTTCTGTTGGAATCTTAGTAAGTCGTGCTATTCATCAAAAAGGTTCAACACTTCGGTTAGCTCTGATCTTTTTGGGTGGAAATGATGATAGGGAAGCTTTATGCTTGGCCAATCGAGCAGCACGGGACCCTACCATTGAACTTGTGGTATATCACATTGTAAACAAGAACAAACATGAAAATGAAGACTTGGATACTATGCTTGATATTACAATGTTAAAAGATGCTGGGAAATCATGCTCTAGTATGGGAAATGTAAGTTATAGAGCACTAGAAGTGGAAGATGGAGTTCAAACTGCTGGTATTCTTAGACAAATGGTAGAGGAGCATGATTTCATTATAGTTGGGAGACGCCATGGCATCAACTCTCCTCAGACAGATGGACTTCAAGAATGGAGTGAGTTTTCTGAGTTGGGTCTGATTGGAGATTATCTTGCTTCTGAGGATCTAGGTTGTAAATCATCCATTTTGGTGGTGCAGCAACAACAACTGCCCCAATAG 2373 0.3881 MQPHIAANETLFSYVTLINSTDYNIADFNVCLSLPPHIISDGIWGGHGTEMSPSKSSFPVFLLQFIVIYATARALHFPVKKLGLPFFISQMIGGLILGPTWSGLEGTLRTLFPYGSQDTLATITAFGFVLFLFETGVKMDYSVIIRTGRKGWIIALLGLITPLLVGFASQNFIPSFFGSVSEKQTETNLIMIVHTTTSFAVIASVLNELQLLNSELGRLTLSCALVGDILSNILITLASTFQYGSVFRIGMIRLGTLLFLVLFILFVYRPAMFWVIEHTPEGKEVQDIYISIIIGILFSLCWFSIVLENGSMTLPFIFGLATPEGTPLGSTLIQRIHLLGRKLLLPIFLTTCAMKVQVQSLAFSTPTLTTAAFIFLMGYLIKFATCLVSSFFFKIPLKDGLALALILSSKGIVEIIMCSTALDRQDLQPKNYSIIIVIIVIASIITHMLVTYLYDPSRKYAGYQKRNLFSLKPNSDLKILVCIHKQHHITPIIRVLDLCYPTTKDPIMVEALHLIKLIGRTSPIFISHKKKKIDVSNLQNSYSENVILTFKLYEDDKQGAASINPYTALSPPNLMYEDVCDLALDRVASIIILPFHRKWSPCGRIEYEDKNMRALNCMVLERAPCSVGILVSRAIHQKGSTLRLALIFLGGNDDREALCLANRAARDPTIELVVYHIVNKNKHENEDLDTMLDITMLKDAGKSCSSMGNVSYRALEVEDGVQTAGILRQMVEEHDFIIVGRRHGINSPQTDGLQEWSEFSELGLIGDYLASEDLGCKSSILVVQQQQLPQ* 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00859 790 PANTHER CATION/H + ANTIPORTER 40 787 - -
Rops10g00859 790 Gene3D - 59 461 IPR038770 -
Rops10g00859 790 Pfam Sodium/hydrogen exchanger family 66 449 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00859 Rops-Chr10 19570836 19573816 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00859 30 788 Antiporter Super Family AT5G22900 35.531 2.01e-158 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00859 K26731 - gmx:100784321 820.846