Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00857 ATGGAAGAAACAAGTCCTACAGAATCTATCAGTGATGCAAAAATGAATCAGCTACCCAAACAAACAGATATTAGCTCAGGGGAGAGATTAGACATTGAATCAAGCTCCTCCTCTTCCAACAGCCTCTCTTCTCCTAATTATATTATCTCCGAGGATGATATAAACAAAGCTCCAGTGGGAATGCAACAGAAAATTCAACGTGTCAGTCAAATTTTAAACCATCCTTCTCTTATTGGACAATCTGGTGTTGGGAAGACAACAATTGTTGAAGGTTTTGCACAGCAGACCACAAAGGGTGAAGTACCTGAAACCGTAGAGGGAAAAAAGGTCAGACTTGGGCATGTCCTCGAGAGGAATGCATTGATATGTGAGGCTGCAAGTATAGAGAGACCATCTGCTGTTACAGATAGTCTATTCATTGGTGGAGCACCAGCTGCAAGATCATTATACACATTGCAACACTTGGGAATCACACATATTCTGTGTTTGTGCATTAATGAAATTGGACAGTCAGATTCTCAGTTTCCTGATCTATTTGCCTACAAAAATTTCTCTGTGTGTGACGATGTGGATTCTAACATCAGCATCATATTTGACGAAGCTTGTGATTTTATAGATTTTGTTGAGCAAACAGAAGCATGGAAAGCTCTGAAACGAGTTCACCCTCGAGCACAGCCCAACGATGGTTTTGCAAGGATCTTACAGGAACTGGATGAGAAACTACATGGGAAGGTTTCAATGGAGTGGCAGCAAAGGAAATCAATGATGAGAACTTGCCCTATCTGTGGCAAAAATGTTGGGGTAAGCAGCAGGTCACTTAAGTTCCATCTTCAGAAATCACATAACAAGCTACCATCAGGGAGTGTAGACAGTGCCATGACAATGGAGCCTCATTCAATGATTGATGAATAG 912 0.4134 MEETSPTESISDAKMNQLPKQTDISSGERLDIESSSSSSNSLSSPNYIISEDDINKAPVGMQQKIQRVSQILNHPSLIGQSGVGKTTIVEGFAQQTTKGEVPETVEGKKVRLGHVLERNALICEAASIERPSAVTDSLFIGGAPAARSLYTLQHLGITHILCLCINEIGQSDSQFPDLFAYKNFSVCDDVDSNISIIFDEACDFIDFVEQTEAWKALKRVHPRAQPNDGFARILQELDEKLHGKVSMEWQQRKSMMRTCPICGKNVGVSSRSLKFHLQKSHNKLPSGSVDSAMTMEPHSMIDE* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00857 303 Gene3D - 49 129 IPR027417 -
Rops10g00857 303 MobiDBLite consensus disorder prediction 1 47 - -
Rops10g00857 303 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 125 243 IPR029021 -
Rops10g00857 303 Gene3D Protein tyrosine phosphatase superfamily 130 212 IPR029021 -
Rops10g00857 303 MobiDBLite consensus disorder prediction 281 303 - -
Rops10g00857 303 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 89 211 IPR035010 GO:0004721|GO:0009737|GO:0043622
Rops10g00857 303 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 58 114 IPR027417 -
Rops10g00857 303 CDD DSP 131 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00857 Rops-Chr10 19536783 19544174 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00857 109 296 Protein tyrosine phosphatase (PTP) family AT5G23720 60.000 1.28e-78 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00857 K14165 K17614 gmx:102661225 298.901