Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00856 ATGACCACCGTCCCCTCCGGCCACCGACCTCCACCGCCTAGACCTCTCACTCCGACCACGGCCTACGACCTCCACTCCCGCCACCAACCTCTCTCACACCGTCTCCTCCCTCTCACCATCACCTCCTCCACCTTCACCACCGCTACTGTCACCCCTGCCTCCACCTCCACAACCACACCATCTCCCCCCAAACCCAATCTCCCTCTCTTCCCACTCCGCCACCGCCCCACCCCTCACCTCACCACTGTCAAGGCCGCTCATCATCCAACTCCCCCATTCTCCACCACCTCAAAACCCTCATTGGAGCCATTTGATTGGGGAACTGGTTGTGTATCCCGTGAGGGGAAAACACAATGTAAGGTTGATAATGTGCGGGATCGGACTGTGGACAAGGATCGAGAAGGTTCTAGGTTGGTTCGCAAGCAATCTGAGCATGATTTTGAGGGTTTTGATAGGAGGAAAGGGTTCGATCGGTATAGGGACAATGGTTTGATTCACTGGTTGGAGAGGTTGGTTCACAAGTCCTTGCATTATTCTGGTTGCCATAAGAATAGAGGTTGGTTCACGTGTTTGATCCAAGTGCAAAGTGCTCCGACAAGTGCTCCGGCGATTACCGTTGAGGTATCAGCTCCGGCTCCGAGCAAGGAGAGGAAGTGGGTGGTTGTTGTTGTTGAAGATGGCGGTAATGTTGAAGTTAGTCACCCTCTCTCCATTTGTGAAACCATGAACTTGCCAACATGGAAGTCCAAGACCATGGCAATGGTTGTCGTTTTGCTTCATCTGAGTTTTTCCTTGGAGGTGTTCAGTTTCTCTTCTCATGCAGATAGAATTGCTTGGCTTCCTGGGCAACCCCACATGGGATTTCAACAGTTCTCAGGATATGTCACTGTTGATGACAAGAAACACAAGTCACTTTTTTATTATTTTGTTGAATCTGAAACTGATCCAGCTTCAAAGCCTCTTGTTCTCTGGCTCAATGGAGGACCTGGTTGTTCTTCACTGGGAGTTGGTGCTTTCTCTGAAAATGGACCCTTTAGACCAAATGGGGAATTTCTGACTAAAAATGAGTATAGTTGGAATAGAGAGGCAAACATGCTGTATTTGGAGACACCAGTTGGAGTGGGGTTCTCTTATGCTAAAGGTAGCTCCTCCTATATGACAGTGAATGATGAGGCAACAGCTAGGGACAACCTTGTATTCCTGCAGCGCTGGTTCAACAAGTTCCCTCAATACAGGAACAGAGATTTGTTTCTAACCGGGGAAAGTTATGCAGGTCATTATGTTCCTCAACTTGCAAAGCTCATGATTGAAATGAACAAAAAGAACAAGATATTCAATCTGAAAGGCATAGCATTGGGTAACCCAGTTCTAGAATATGCCACTGACTTCAATTCAAGGGCTGAGTTCTTCTGGTCTCATGGACTAATATCAGATTCAACGTACAACATGTTCACTAGAGTGTGTAATTACTCTCGATACGTGAGTGAGTACTATAGAGACTCGGTTTCGCCTCTTTGTTCAAAGGTTATGGGACAGGTGAGCAAAGAAACCAGTAAATTTGTGGACAAATATGATGTCACTCTTGATGTTTGCATTTCCTCAGTGCTATCACAATCCAAGGTTATTTGTCCTCAAACCCAACAAGCAAATGAGAGGATAGATGTGTGTGTAGATGACAAGGTTACAAACTACTTAAACCGAAGAGATGTACAAGAGGCACTTCATGCCAAGCTTGTTGGAGTTCGTAAGTGGGGTGTCTGTAGCAACATCCTGGACTATGATATGCTCAATCTGGAAGTGCCAACACTCCCTATTGTTGGATCACTAATAAAAGCTGGAGTTCGGGTCTTAATTTACAGTGGAGATCAAGATTCAGTAATTCCACTGACAGGAAGCCGCACTTTAGTTCAAAAGTTGGCAAGACAATTAGGACTGAATTCAACTGTCCCTTACAGAGTATGGTTTGAAGGCCAGCAGGTTGGTGGGTGGACTCAAGTTTATAGCAATATCCTCTCATTTGCTACTGTTAGAGGTGCCTCCCATGAAGCCCCTTTCTCACAGCCTGAAAGATCACTTGTGCTATTCAAGTCATTCTTGGAAGGCAGGCCTTTGCCTGAATTTTTCTGA 2127 0.4631 MTTVPSGHRPPPPRPLTPTTAYDLHSRHQPLSHRLLPLTITSSTFTTATVTPASTSTTTPSPPKPNLPLFPLRHRPTPHLTTVKAAHHPTPPFSTTSKPSLEPFDWGTGCVSREGKTQCKVDNVRDRTVDKDREGSRLVRKQSEHDFEGFDRRKGFDRYRDNGLIHWLERLVHKSLHYSGCHKNRGWFTCLIQVQSAPTSAPAITVEVSAPAPSKERKWVVVVVEDGGNVEVSHPLSICETMNLPTWKSKTMAMVVVLLHLSFSLEVFSFSSHADRIAWLPGQPHMGFQQFSGYVTVDDKKHKSLFYYFVESETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGEFLTKNEYSWNREANMLYLETPVGVGFSYAKGSSSYMTVNDEATARDNLVFLQRWFNKFPQYRNRDLFLTGESYAGHYVPQLAKLMIEMNKKNKIFNLKGIALGNPVLEYATDFNSRAEFFWSHGLISDSTYNMFTRVCNYSRYVSEYYRDSVSPLCSKVMGQVSKETSKFVDKYDVTLDVCISSVLSQSKVICPQTQQANERIDVCVDDKVTNYLNRRDVQEALHAKLVGVRKWGVCSNILDYDMLNLEVPTLPIVGSLIKAGVRVLIYSGDQDSVIPLTGSRTLVQKLARQLGLNSTVPYRVWFEGQQVGGWTQVYSNILSFATVRGASHEAPFSQPERSLVLFKSFLEGRPLPEFF* 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00856 708 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 277 688 IPR001563 GO:0004185|GO:0006508
Rops10g00856 708 Gene3D - 556 592 - -
Rops10g00856 708 MobiDBLite consensus disorder prediction 1 22 - -
Rops10g00856 708 FunFam Carboxypeptidase 602 701 - -
Rops10g00856 708 Gene3D - 602 701 - -
Rops10g00856 708 FunFam Carboxypeptidase 270 705 - -
Rops10g00856 708 PRINTS Carboxypeptidase C serine protease (S10) family signature 671 684 IPR001563 GO:0004185|GO:0006508
Rops10g00856 708 PRINTS Carboxypeptidase C serine protease (S10) family signature 404 429 IPR001563 GO:0004185|GO:0006508
Rops10g00856 708 PRINTS Carboxypeptidase C serine protease (S10) family signature 355 367 IPR001563 GO:0004185|GO:0006508
Rops10g00856 708 PRINTS Carboxypeptidase C serine protease (S10) family signature 368 378 IPR001563 GO:0004185|GO:0006508
Rops10g00856 708 SUPERFAMILY alpha/beta-Hydrolases 281 705 IPR029058 -
Rops10g00856 708 Gene3D alpha/beta hydrolase 272 533 IPR029058 -
Rops10g00856 708 MobiDBLite consensus disorder prediction 1 18 - -
Rops10g00856 708 ProSitePatterns Serine carboxypeptidases, serine active site. 418 425 IPR018202 GO:0004185
Rops10g00856 708 Pfam Serine carboxypeptidase 284 701 IPR001563 GO:0004185|GO:0006508
Rops10g00856 708 ProSitePatterns Serine carboxypeptidases, histidine active site. 671 688 IPR033124 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00856 Rops-Chr10 19526191 19533373 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00856 564 704 Calmodulin-binding Proteins AT2G22960 29.078 2.23e-15 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00856 K16297 - gmx:100795668 870.922