Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00837 ATGGGAAAATGGAAGAAAAATATGATTCTGAAAGCGTGGCGATCAATTGGAAACAAGAGGTCACTATTCAAAGCTAGTTCAAAACCAATGAGGACAGAAAATGAGAAGGGTCAAATAGCCCCTAATGGTTGTTTTTCAGTATATGTTGGACCACAGAGACAAAGGTTTATTGTAAAGACCAAGTATGTTAACCACCCATTATTTCAGATGCTGCTGGATGAAGCAGAACTAGAGTATGGGTTTAAAAATGATGGCCCTATTTGGCTTCCATGCAAAGTTGATTTGTTCTACAAAGTGTTAGCTGAAATGGATGACCAAGAACAAGAGGGTATAATTCCTGGTACTCGTAGTCATAGAAGCTTTACCACCAAGTCCAAGGGGATTTCCTTTTTCGTTCTTCGAAGCCCTGCTCGTTTGCTTTGTTATAAGGGTCATGGTGCATATAGTGTTATTGATTCGGAAATGCTGAAAATAAACCACCCATTTCAATGA 492 0.3902 MGKWKKNMILKAWRSIGNKRSLFKASSKPMRTENEKGQIAPNGCFSVYVGPQRQRFIVKTKYVNHPLFQMLLDEAELEYGFKNDGPIWLPCKVDLFYKVLAEMDDQEQEGIIPGTRSHRSFTTKSKGISFFVLRSPARLLCYKGHGAYSVIDSEMLKINHPFQ* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00837 163 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 28 99 IPR003676 GO:0009733
Rops10g00837 163 Pfam Auxin responsive protein 18 101 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00837 Rops-Chr10 19184763 19185254 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00837 32 101 Calmodulin-binding Proteins AT4G34750 44.286 1.58e-17 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00837 K14488 - gmx:100793967 193.741