Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00827 ATGGAGAAACACCAAGTGATATTCCCTACCTCATGTGCATCATCATCTGCTTTTCCATCAGATTTTAAAGTTGATTATAATTCTAATGATCATGTTGAGAAGGAAGACGTTTTAAGAACCCAAAGGAAGGCATTACCAGAGCAGAAAGAAAGTGACAAAGAGATCAAGCATCAAAGATATGCATTTCAAACAAGGAGTCCCATTGATGTACTGGACGATGGGTACCAGTGGAGAAAATATGGGAAAAAGATAGTGAAAAACAATAAATTTCCAAGAAGTTACTACAGGTGCTCTCATCGAGGTTGCAATGTCAAGAAACAAATCCAACGCCATTCCCAAGATGAACAGATCGTGGTAACAACCTACGAAGGGATGCATACGCACCCTGTAGATAAGTCAGCTGAAAGTTTCGACCGGATCTTGGGAAACCTTGTAAGCAACGTACTCTGTAATGTACCTCCAACGTTGGAATAG 474 0.403 MEKHQVIFPTSCASSSAFPSDFKVDYNSNDHVEKEDVLRTQRKALPEQKESDKEIKHQRYAFQTRSPIDVLDDGYQWRKYGKKIVKNNKFPRSYYRCSHRGCNVKKQIQRHSQDEQIVVTTYEGMHTHPVDKSAESFDRILGNLVSNVLCNVPPTLE* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00827 157 SUPERFAMILY WRKY DNA-binding domain 63 130 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops10g00827 157 FunFam WRKY transcription factor 57 57 131 - -
Rops10g00827 157 Pfam WRKY DNA -binding domain 72 129 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops10g00827 157 SMART WRKY_cls 71 130 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops10g00827 157 ProSiteProfiles WRKY domain profile. 66 131 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops10g00827 157 Gene3D WRKY domain 55 131 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops10g00827 157 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 33 133 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00827 Rops-Chr10 18971084 18972169 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00827 58 144 WRKY Transcription Factor Family AT5G13080 68.966 2.85e-45 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Rops10g00827 WRKY 5.4e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00827 - - gmx:100796070 249.21