Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00812 ATGGTTTCAGTGAGTGAGAAATTCAAGGGCTTCGTGGGGCACAGATGGGTGGTGTTTGTTTGTGCAATGTGGGATATGTCATTTGCAGGGACAGCTTACATGTTTGGGAGCATATCACCGGTCATAAAGAGCAACATGGGTTACAACCAGAAGCAGGTGGCTTTATTGAGTGTGGCCAAGGATTTGGGTGATGCCGTTGGGCTTCTGGCTGGGAAACTAAGCGAGGTATGGCCCACTTGGGGAGTTATACTTGTTGGGGTGATCCAGAATTTTGTTGGTTATGGTTTGGTTTGGCTTGTTGTCACTCACAGGTTCCCTTCTCTTCCTTTATGGGTGTTGTGCATTCTTATCTTCGTGGGACAAAATGGATCTACATATTACTACACAGCTGCTCTCGTTTCTTGCGTGCAAAATTTCCCAGAAAGAAGAGGGCCCGTGGTGGGGATATTGAAGGGCTTTGTTGGCTTAAGTGGTGCTATTTGGACTCAAATAATAGCTATGATCAATATCCCTGATCAGGCATCTCTGATTTTCATTATAGCAGTTGGACCCGCAATGGTTTCTTTTACCCTCATGTTCATCATAAGACCCGTTGAAAGTTACAATCAGTCTAGAGCTTCTGATGGTTCAGGCTTCATGTTTATCTACAGCATTTGTCTTCTCTTGGCTGCTTATTTGATGGGAGTTTTGCTACTAGAGAATATGTTGGATTTGGACCAAAGCACCATCACTTTGTTTGCAGTTATTTTGATCATTTTCATATTGCTTCCTATTATAGTTCCTGTTCTATTGGTTTTCTTCTCAGAACCCAAAAGTCCTGTTGAGGAAACACTTCTTGAACCACCAATGCCAGTAGCAACAAAACCTATTAACGTGACTGATGAGACCAGTTCTAGCTCCAAACATGTTGAAGATGAGAAGCCTACAACAGAAAGGCCAAGGGAATTGGTTCAATGTCATGCTAAACTTTTTCATTCAGTCATTGTGGTTGTGAAGAAAATCAAGCCAAAAAATGGCCCAAATATAGGAGAGGATTTCACATTAACACAAGCACTGGTCAATGCTGACTTTTGGATCATGTTTTTAACTCTCATCATGGGCGCTGGATCGGGGTTGACAATGATAAACAACATGGGTCAGATTTGTCAATCATTGGGAGATGACAATGTCAATGTGTATGTATCAGTTACCAGCATATCGAACTTCCTTGGTCGAGTTGGTGGTGGCTACTTCTCAGAGGTTATAGTCAGAAATTTTGCGTACCCGAGACTTGTTACATTGATAGTGGTTCAAGCAGTGATGTCTTTGGGACTATTCTACTGTGCCCTGGGCTTGGTTGGACAAGCTTACGTGGTGGCCATAACCATGGGTTCAGGGTTTGGTGCCCACTGGTCAATTGCAATAGCTGCAGCTTCAGAACTATTTGGGTTGAAGAACTTTGGGACTTTGATCAATTTTCTTGCCATGGCTATCCCAGCTGGATCTGTGCTTTTAGGATTAGTAGCTAGCACAATATACGACTATTACGCGGAGCAGCAAGCAAAGCAAGGAATGCAAGCTTATGGAGCCTCTGCGAAATGGGCAATGCCTTATATTACTGGAAATAATGAATTGCTTGTTTGTGAGGGAAACATATGCTATTCCCTTTCGTGTGGAATCTTAGCTCTTGTTTGCCTATTTGCAGCTGCTTTAAATTTGATTACAGTTCGCCGAACAAAGAGATTCTATGCCCAACTTTATGGGAAGTCTTGA 1752 0.4275 MVSVSEKFKGFVGHRWVVFVCAMWDMSFAGTAYMFGSISPVIKSNMGYNQKQVALLSVAKDLGDAVGLLAGKLSEVWPTWGVILVGVIQNFVGYGLVWLVVTHRFPSLPLWVLCILIFVGQNGSTYYYTAALVSCVQNFPERRGPVVGILKGFVGLSGAIWTQIIAMINIPDQASLIFIIAVGPAMVSFTLMFIIRPVESYNQSRASDGSGFMFIYSICLLLAAYLMGVLLLENMLDLDQSTITLFAVILIIFILLPIIVPVLLVFFSEPKSPVEETLLEPPMPVATKPINVTDETSSSSKHVEDEKPTTERPRELVQCHAKLFHSVIVVVKKIKPKNGPNIGEDFTLTQALVNADFWIMFLTLIMGAGSGLTMINNMGQICQSLGDDNVNVYVSVTSISNFLGRVGGGYFSEVIVRNFAYPRLVTLIVVQAVMSLGLFYCALGLVGQAYVVAITMGSGFGAHWSIAIAAASELFGLKNFGTLINFLAMAIPAGSVLLGLVASTIYDYYAEQQAKQGMQAYGASAKWAMPYITGNNELLVCEGNICYSLSCGILALVCLFAAALNLITVRRTKRFYAQLYGKS* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00812 583 CDD MFS_Mch1p_like 14 562 - -
Rops10g00812 583 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 16 577 - -
Rops10g00812 583 SUPERFAMILY MFS general substrate transporter 210 574 IPR036259 -
Rops10g00812 583 MobiDBLite consensus disorder prediction 290 311 - -
Rops10g00812 583 Gene3D MFS general substrate transporter like domains 14 203 IPR036259 -
Rops10g00812 583 Gene3D MFS general substrate transporter like domains 354 576 IPR036259 -
Rops10g00812 583 SUPERFAMILY MFS general substrate transporter 14 256 IPR036259 -
Rops10g00812 583 Pfam Nodulin-like 15 262 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00812 Rops-Chr10 18739189 18742603 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00812 3 583 Nodulin-like Gene Family AT5G14120 49.915 0.0 556
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00812 - - mtr:11421299 825.469