Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00810 ATGGTTTCGATGCGTGAGAAATTCAAGGGCTTCGTGGGGCACAGATGGGTGGTGTTTGTTTGTGCGATGTGGGATTTATCATTTGCAGGAACAGCTTACATGTTTGGGAGCATATCACCGGTCATAAAGAGCAACATGGGTTACAACCAGAAGCAGGTGGCTTTCTTGAGTGTGGCCAAGGATTTGGGTGATGCCGTTGGGCTTCTGGCTGGGAAAATCAGTGAGGTATGGCCCACTTGGGGAGTTATGCTTGTTGGGGTGATCCAGAATGTTGTTGGTTATGGCTTGGTTTGGCTTGTTGTCACTCACAGATTCCCTTCTTTGCCTTTGTGGGCGTTATGCTTTTTTATCTTTGTCGGACAAAATGCATCTACATATTACAACACAGCTGCTCTTGTTTCCTGTGTGCAAAGTTTCCCAGAAAGTAGAGGGCCCGTGGTGGGGATATTGAAGGGCTTTATTGGCTTAAGCGGTGCAATTTGGACTCAAATAATAGCTATGATCAATATCCCTGATCAAGCATCTTTAATTTTCATCATAGCAGTTGGACCTGCAATGGTTTCTTTCACTCTCATGTTCATCATAAGACCTGTTGAAAGTTACAAACAATCCAGAGCTTCCGATGGTTCAGGCTTCATGTTTATCTACAGCATTTGTCTTCTCTTGGCTGCATATTTGATGGGAGTTTTGTTGCTAGAGAATATGTTGGATTTGGACCAAAGCACCATCACATTATTTGCAATTATTTTGATCATTCTCATATTGCTCCCCATTATAGTTCCTATTCTACTGGTTTTCTTCTCAGAACCCAAAAGTCCAGACGAGGAAACCCTTCTCGAACCACCAATGCCAACAACAGCAAAATCTATGCACGTGACTGATGAGACTAGTACTAGTGCTACTGCCAAACATGTTGAAGATGAGAAGAGTCCAAAGCTAGAGGTTCCGGTATCAGAAGGGTCAAGGGACACGGTTCAATGTCATGCTAAACTTTTTCAAGCAGTCATTACAGTTGTGAAGAAAATCAAGCCAAAAAATGACCCACATATAGGAGAGGATTTCACGTTAACACAAGCACTGGTCAATGCTGACTTTTGGATCATGTTTTTGACTCTCACCATGGGCTCTGGATCGGGCTTGACAATGATAAACAACATAGGACAAATTTGTCAATCATTAGGAGATGACAATGTCAATGTGTATGTATCAGTTATTAGCATATCCAACTTCCTTGGTCGTGTTGGTGGTGGCTACTTCTCAGAGGTTATAGTAAGAAAATTTGCGTACCCGAGACTTATTGCATTGATAGTGGTTCAGGCAGTGATGTCTTTGGGACTCTCCTACCATGCTTTGGGTTTTGTTGGACAAGTTTACGTGGTGGCCATAACTATGGGTTCAGGGTTTGGAGCCCAATGGTCAATTGCGATAGCTGCAGCTTCAGAATTGTTTGGGTTAAAGAACTTTGGGACATTGTTTAATTTTCTTACTATGGCGTGCCCTGCTGGATCTTTGCTTTTATCTGGATTGGTAGCTAGCACAATATACGACTATTACGCAGAGCAGCAAGCAAAGCACCAAATGTCTTCTATAACTGGAAATGATGAATTCCTTCTTTGCGAGGGAAACATATGCTATTCCCTTACTTGTGGAATCTTAGCAGTAGTTTGCATATTTGCAGCTGCTTTGAATTTGATCACAGTTCACCGAACTAAGAGGTTCTATGCCCAACTTTATGGGAAGTCTCGAACCTGA 1752 0.4252 MVSMREKFKGFVGHRWVVFVCAMWDLSFAGTAYMFGSISPVIKSNMGYNQKQVAFLSVAKDLGDAVGLLAGKISEVWPTWGVMLVGVIQNVVGYGLVWLVVTHRFPSLPLWALCFFIFVGQNASTYYNTAALVSCVQSFPESRGPVVGILKGFIGLSGAIWTQIIAMINIPDQASLIFIIAVGPAMVSFTLMFIIRPVESYKQSRASDGSGFMFIYSICLLLAAYLMGVLLLENMLDLDQSTITLFAIILIILILLPIIVPILLVFFSEPKSPDEETLLEPPMPTTAKSMHVTDETSTSATAKHVEDEKSPKLEVPVSEGSRDTVQCHAKLFQAVITVVKKIKPKNDPHIGEDFTLTQALVNADFWIMFLTLTMGSGSGLTMINNIGQICQSLGDDNVNVYVSVISISNFLGRVGGGYFSEVIVRKFAYPRLIALIVVQAVMSLGLSYHALGFVGQVYVVAITMGSGFGAQWSIAIAAASELFGLKNFGTLFNFLTMACPAGSLLLSGLVASTIYDYYAEQQAKHQMSSITGNDEFLLCEGNICYSLTCGILAVVCIFAAALNLITVHRTKRFYAQLYGKSRT* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00810 583 Pfam Nodulin-like 15 262 IPR010658 -
Rops10g00810 583 MobiDBLite consensus disorder prediction 276 317 - -
Rops10g00810 583 SUPERFAMILY MFS general substrate transporter 205 572 IPR036259 -
Rops10g00810 583 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 16 575 - -
Rops10g00810 583 SUPERFAMILY MFS general substrate transporter 8 199 IPR036259 -
Rops10g00810 583 CDD MFS_Mch1p_like 14 560 - -
Rops10g00810 583 Gene3D MFS general substrate transporter like domains 363 581 IPR036259 -
Rops10g00810 583 Gene3D MFS general substrate transporter like domains 13 208 IPR036259 -
Rops10g00810 583 MobiDBLite consensus disorder prediction 300 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00810 Rops-Chr10 18707453 18723999 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00810 3 583 Nodulin-like Gene Family AT5G14120 52.921 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00810 - - gmx:100784744 864.374