Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00809 ATGGAATGTAACAAAGATAATGCTATTAGGGCTAAAGAGCTTGCAGAGACAAAGCTTTTACAGAGGGACCTTGGGAGCGCAAGAATACTTGCAAAGAAGGCTCAAGACTTATATCCCAATCTTGATGGCCTTTGTCAGTTGCTGGCAACTATTGATGTTCATACTGCTGCTAATAAAAAAGTTAATGGGGAAGTAGATTGGTACAGAGTCCTTGGTGTGCAGCCCTTTGCTGATGACGAAACGATTCGAAGACATTATAGGAAACTGGCTCTTGCTCTGCACCCTGATAAAAATAAATCAGTAGGTGCAGATGGAGCATTTAATCTTATCACACAAGCTTGGAGTTTATTATCTGATAAAGCCAAGAGAATTGCCTATGACCAGAAGTACAATTTATCGGGTACATATCAAGGTATTCCGGGTGGGAAACCTTCTGTACCACAAGCTAGTCAGAGTGGTTACTGTAATATCTTCAATACTTCTAACTTGAAGGACAGAGATCCTAGGAGTTCAATTCATCCCAATCCAACTCCAGGATCTTCTGTGTCATTGAAACAGACATTTTGGACCATGTGCAGTTCCTGCAGGACACATTTTGAATACAATTCTGTTTATATCAACTTCACTCTTGTCTGTACCAGCTGTCATAAGTCATTTTTTGCTTTTGAGGTACCAGCCCCACCTGTATATGGAAATGCTTCATCCATTTCAAGAATTTCTCAGATGAACCAACATAACTACAACTCAACCAGAATGGAAAGAAATCTTCATGTTTCAGGAAGGACACCAATGTATGCTGCTAACTCATCACCTGGGTTGCGTCCTTTCTCTATGCCTGGTGGTATTTCCAGTGTACCGACATCAGCTTCTACTGCTGCTTTCGCTCCTGGTGTTTGTAAGATGTCATCTGAGAATTTGAAGAGAAGGCGTGAAGATTCAACACCTGTTATGAGGGAAGAGGCGCATTTTGGGAAAACTCATTCTGCTCTGAAAGGAGATAAGTCAAGGAAAAAAAGGCGCACAGATGAACATAAAGTTGATAGTAATAGAAGAGATATGGATACTGAAATAGCATCTCAAAATGAAGGAATTAACTTGACTAAAGACTTTGGGTCTCAGAAGGATAATTTTGATACAGGAAGGGTTAATGCTGCTGGAAATTACAAACGTAATGGTATTAAGGACCTATCACACCTGCAAACGAAGAACATGTTGATGGAAATGGCTCGGAAGAAAATTCGTACAAAGCTTGATGAATGGAATGCATCTTCTGTTTCAAAGAATTTAGACAAGTCGAAGAATGCTGGTATAGAAGTCAAAGAAAGGGCCATAAATGGTGTGAAGCCTAGTGCACAAGAATTTGTTGATTCTGAGACCATTGAGAAAAAGTATTTTCCTGCCGATTCGGAGGTTCCTGGTTCTCTTTCCATGAGTGTTCCAGACCCAGATTTCCATGATTTTGATGGGGACCGTGTTGAAAACGCTTTTGGTGAGAACCAGGTGTGGGCTGTATATGATAATGATGATGGCATGCCACGCTACTATGCCTTAGTCCACAATGTGATATCAAAGAATCCTTTTCAAATGAGGATTAGTTGGCTGAACTCTAAAACCAATGATGAATTGGCCCCAATAAAGTGGGTCAGTTCTGGCTTTCCTAAGACCACTGGTGATTTGCGAATTGGCAAGCGGGAATTATATAGCACTCTCAATTCCTTCTCACACAAAGTTAAATGGACAAAAGGATCAAGAGGAGCTGTCCAAATATATCCAAAGAAAGAGGATGTTTGGGCTCTATATCGGAATTGGTCCCTTGATTGGGATCAATTTACTGAAGATGAAATCATCCATAAATATGACATGGTGCAAGTTCTTGAAGACTACAATGAAGAGCAAGGTGTGAATGTTGCTTCACTTGTGAAGGTTGCAGGTTTCAAGACAGTATTCTGTCAGAATACCGATACAAAAAAGATCAGGAATATTTCAAAGGCTGAGATGTTTCGATTTTCACACCAGGTACCTTCATACCTGCTTACTGGTCAAGAAGGTCATAATGCTCCAAGAGGTTGCTTGGAGCTTGATCCTGCTGCTACGCCAATGGAACTTCTTCAGGTGGGCACTGAAGCTCCAGAGCAAGGTAGGCCTGAAATTTTGTTTGTATATAAGCGGAAACGTTTTGGGGAGAAAACAGAGCTATGA 2199 0.4084 MECNKDNAIRAKELAETKLLQRDLGSARILAKKAQDLYPNLDGLCQLLATIDVHTAANKKVNGEVDWYRVLGVQPFADDETIRRHYRKLALALHPDKNKSVGADGAFNLITQAWSLLSDKAKRIAYDQKYNLSGTYQGIPGGKPSVPQASQSGYCNIFNTSNLKDRDPRSSIHPNPTPGSSVSLKQTFWTMCSSCRTHFEYNSVYINFTLVCTSCHKSFFAFEVPAPPVYGNASSISRISQMNQHNYNSTRMERNLHVSGRTPMYAANSSPGLRPFSMPGGISSVPTSASTAAFAPGVCKMSSENLKRRREDSTPVMREEAHFGKTHSALKGDKSRKKRRTDEHKVDSNRRDMDTEIASQNEGINLTKDFGSQKDNFDTGRVNAAGNYKRNGIKDLSHLQTKNMLMEMARKKIRTKLDEWNASSVSKNLDKSKNAGIEVKERAINGVKPSAQEFVDSETIEKKYFPADSEVPGSLSMSVPDPDFHDFDGDRVENAFGENQVWAVYDNDDGMPRYYALVHNVISKNPFQMRISWLNSKTNDELAPIKWVSSGFPKTTGDLRIGKRELYSTLNSFSHKVKWTKGSRGAVQIYPKKEDVWALYRNWSLDWDQFTEDEIIHKYDMVQVLEDYNEEQGVNVASLVKVAGFKTVFCQNTDTKKIRNISKAEMFRFSHQVPSYLLTGQEGHNAPRGCLELDPAATPMELLQVGTEAPEQGRPEILFVYKRKRFGEKTEL* 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00809 732 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Rops10g00809 732 PANTHER BNAC03G44070D PROTEIN 1 699 - -
Rops10g00809 732 Pfam DnaJ domain 66 127 IPR001623 -
Rops10g00809 732 Gene3D DnaJ domain 52 137 IPR036869 -
Rops10g00809 732 MobiDBLite consensus disorder prediction 304 372 - -
Rops10g00809 732 PRINTS DnaJ domain signature 68 86 IPR001623 -
Rops10g00809 732 PRINTS DnaJ domain signature 102 122 IPR001623 -
Rops10g00809 732 PRINTS DnaJ domain signature 86 101 IPR001623 -
Rops10g00809 732 MobiDBLite consensus disorder prediction 304 357 - -
Rops10g00809 732 SUPERFAMILY Chaperone J-domain 63 144 IPR036869 -
Rops10g00809 732 SMART dnaj_3 65 122 IPR001623 -
Rops10g00809 732 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Rops10g00809 732 CDD DnaJ 66 119 IPR001623 -
Rops10g00809 732 MobiDBLite consensus disorder prediction 358 372 - -
Rops10g00809 732 Pfam Domain of unknown function (DUF3444) 476 682 IPR024593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00809 Rops-Chr10 18692667 18694865 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00809 4 228 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 30.303 3.95e-27 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00809 - - gmx:100797672 959.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g00809 10 18692667 18694865 Rops10g00809 10 18692667 18694865 ECH