Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00791 ATGAGATACGAAGCTACTCCTGGCATCAAGTCTGAAGTTTCATGGGCTTCATTTATGAAGCGGGTTTTCATAATCCTGAATGGACTTGTCCTTTCTTTGGCGTATTTTGCTGAGCGAGAAAGCATTTTTTGGTCGTGCCTTATTGGTGCTGTTTGGATTGTTGTTGGATCAGATGGTTTTGTTGTTGTATCAATGGAGCAACTCCTGGTTGCCCTGGTTACCGAAATCTCTTTGGGAATGGTCAGTAAAGTTCGTATCGTGTGTGTGTCTATCGTTGAAGCCAAACGAAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGAGAAAGAAGCATGGTTTCAACGAGACGCAACAGTGGATCTCTCTCTGGCGCTTCTAACAGTGCCAAAAGACCTTCTTCTTCTGAAGACAAACCTCCTTCTTCTCCTTCATCTAAGCGCCAAAAGGTCGACAATGGTGCTGCTTCCTCGGAGAAACCGATGCCGCCGGCGGAGAATTCCAAGGATTTGTCCACTCCTGAGCCTCCCGCCGATCCTGGAGAATGCGGTCCCGCCGATGCTCAGATCGCCGGTTCCGATGGTAAGACCGATGCTACGCCGCCGATCGCCGACGGTTCTTCACCGACTCTGGTGGCTGATAAGCCCAGGGCTTCGTTCTCTTCGTGGAGCATATATCAGAAGCAAAACCAAAACCACGAGGCTTCAGCTCCATGGTGTAGGCTTCTGTCACAGTCTGCACAGAATCCAAATGTTCCCATTTGCACACCCAACTTTACTATTGGCTCTAGCAGAAGTTGCAACTTTCCATTGAAGGATCATACAATAAGTGGGAATTTATGCAAGATCAAGCATACCCAGCGCGAGGGAAGTGCTGTGGCTGTGCTAGAAAGTACGGGTAACAAAGGATCTGTGCTAGTAAATGGGACGCTTGTCAAGAAGAATACCAGCTGCGTGCTTAACTCGGGTGACGAGGTGGTTTTTGGTTTGCTGGGAAATCATTCTTATATTTTTCAGCAAATAAATACTGAGGTTGCAGTTAAGGGTGCAGAAGTTCAGAGTGGTGTTGGCAAATTTCTGCATCTTGAAAGGAGAGCTGGAGACCCTTCAGCTGTGGCTGGGGCTTCTATTTTGGCTTCTCTATCTAGCCTCAGACAGGATCTTACTAGATGGACGTCTCCATCTCAGACCACCAGTAAACCTCACCAGGGTGCTGATGTTTCAAGTCATTCTGTTCTCCCTGATGGTACAGAAACTGAGCTTGATGGCCTGGAAGGAAACTCAGCTCCAAATGTAGGGACTGATAAAGCTGCTGATGTTGGAGCAAGCGACAAGAATTCTCCTATGGATTGCGATCCAGATGATGCAGTCACAGAGGCAGGCAATGTATTGGAAGAAAGAAATGGGACGAGGGATGCGCAAGCTGCATCGACTTCGGGTAAATCTGTACGCTGTGCAGTTTTTAAAGAAGATGTTCATACCGCAATAATGGATGGAAAAGAAATAGAAGTGTCCTTTGACAACTTCCCATACTATTTAAGCGAGAATACAAAGAATGTCCTGATTGCAGCTTGCGTCATACATCTGAAGCATAAAGATCATGCTAAGTACACCACAGATCTTACAACAATAAATCCTCGTATTCTACTCTCAGGACCTGCAGGGTCAGAAATATATCAGGAAATGTTGGCAAAAGCACTTGCAAAATACTTTGGAGCCAAATTGCTCATATTTGATAGCCATTTGCTTTTGGGTGGTTTATCTTCTAAGGAAGCTGAATTGCTCAAAGATGGATTTAATGCTGAGAAATCCTGCAGCTGTGCCAAGCAAAGTCCTACAGCCACAGACATCGCTAGTAGCATAGATCCATCAGCAAGTGAAACAGATACACCTAGCCCTTCTAATGCACCTGCTTCATATGGCCTCGAATCTCAACCTAAGTTGGAAACTGATAGTGCACCATCTAACTCTGGGACTGCTAAAAATTGCTTGTTTAAACTAGGTGATAGGGTAAAATATAGCTGTTCATCTTCTGGTGGCTTGTATCAGACATCTTCTTCAAGGGGACCACCCAATGGAAGTCGGGGGAAGGTTGTCTTGCTTTTTGATGATAATCCATTGTCAAAAATTGGTGTAAGATTTGATAAACCTATACCTGATGGAGTTGATCTTGGAGGTGTCTGTGAGGGAGGTCAAGGATTTTTCTGCAACGTCACTGATCTTCGATTGGAAAACAGTGGCATTGAAGAACTCGACAAAATACTTATTAATACATTGTTTGAGGTTGTGTTTAGTGAGAGCCGAAATGCACCTTTCATTTTGTTCATGAAAGATGCAGAGAAGTCTATAGTAGGAAATGGAGATCCATATTCATTTAAAAGTAGGCTTGAAGGGCTTCCAGACAATGTGGTAGTAATAGGTTCACACACACAAACTGACAGTCGAAAGGAAAAGTCACATCCTGGGGGTTTGCTTTTTACAAAGTTTGGCAGCAATCAGACTGCCCTTCTTGACTTGGCTTTCCCAGATAGTTTCGGAAGATTGCATGACAGGGGGAAGGAAGTCCCAAAGCCAAACAAAACGTTGACTAAACTTTTCCCAAATAAAGTCACAATTCACATGCCACAGGATGAGGCACTTCTAGCGTCTTGGAAGCAGCAACTTGACCGAGATGTTGAGACTCTAAAAATCAAAGGAAATTTACACCATTTGCGCACGGTTTTGAGCCGTTGTGGGATGGAATGTGAAGGACTTGAGACCTTCTGTATTAAGGATCAGACACTTACAAATGAAAATGCAGAGAAGATCATTGGTTGGGCTTTAAGTCACCATCTCATGCAGAATGCTGAAGTTGGTCCTGATGCAAAGCTTGTGTTGTCTTGTGATAGCATCCAGTATGGAATTGGGATCTTACAGGCTATCCAGAATGAGTCAAAGAGCCAGAAGAGGTCTCTTAAGGACGTTGTAACAGAAAACGAGTTTGAAAAGAGGCTTTTGGCTGATGTTATTCCACCTAGTGACATTGGTGTTACTTTTGATGATATTGGAGCTCTTGAAAATGTCAAGGATACGTTGAAGGAATTGGTGATGCTTCCTTTACAGAGGCCTGAGCTTTTCTGCAAAGGGCAATTAACCAAGCCGTGCAAGGGTATCCTATTATTTGGTCCCCCTGGAACAGGAAAAACAATGCTTGCAAAGGCAGTTGCTACTGAAGCTGGTGCAAATTTCATCAACATTTCCATGTCAAGCATCACATCTAAGTGGTTTGGTGAGGGTGAAAAATATGTGAAAGCTGTTTTCTCCCTGGCGAGTAAAATTGCTCCTAGTGTGATATTTGTTGACGAAGTTGATAGCATGTTAGGCCGGAGGGAAAATCCAGGGGAGCATGAGGCCATGCGAAAGATGAAAAATGAGTTCATGGTGAACTGGGATGGCTTACGTACAAAGGATACTGAGCGTGTTCTTGTGCTTGCAGCTACTAATAGGCCTTTTGACCTTGATGAGGCTGTCATACGGAGGCTGCCTCGGAGATTAATGGTAAATTTGCCAGATGCTCCAAATAGAGCAAAAATATTAAAAGTTATACTGGCAAAAGAGGACTTGTCTTCTGATATTGATCTGGGTGCAATTGCAAGTATGACTGATGGATATTCCGGAAGTGATCTTAAGAATTTGTGCGTTACTGCGGCACACCGTCCAATTAAAGAGATATTAGAAAAGGAAAAAAAGGAACAAGCTGCTGCTCTAGCAGAAGGAAAGCCTGCTCCAGCATTAAGTGGAAGTGCAGATATCCGATCTTTAAACATGGAAGACTTCAAACATGCTCATCAACAGGTATGTGCAAGTGTTTCCTCAGAATCCGTAAATATGACTGAGCTTTTGCAATGGAATGAACTATATGGTGAAGGTGGTTCAAGAGTAAAGAAAGCACTCAGCTATTTCATAGTTGCGGGGGATGGGTTAGCTCATTTGTTCGTTTGGATGAACCATCTGAGGTTTACATTTGAAGCTGAGGTCCAAACGTATACTGACTGA 4044 0.4374 MRYEATPGIKSEVSWASFMKRVFIILNGLVLSLAYFAERESIFWSCLIGAVWIVVGSDGFVVVSMEQLLVALVTEISLGMVSKVRIVCVSIVEAKRRKKKKKKKKKKKKKKRERSMVSTRRNSGSLSGASNSAKRPSSSEDKPPSSPSSKRQKVDNGAASSEKPMPPAENSKDLSTPEPPADPGECGPADAQIAGSDGKTDATPPIADGSSPTLVADKPRASFSSWSIYQKQNQNHEASAPWCRLLSQSAQNPNVPICTPNFTIGSSRSCNFPLKDHTISGNLCKIKHTQREGSAVAVLESTGNKGSVLVNGTLVKKNTSCVLNSGDEVVFGLLGNHSYIFQQINTEVAVKGAEVQSGVGKFLHLERRAGDPSAVAGASILASLSSLRQDLTRWTSPSQTTSKPHQGADVSSHSVLPDGTETELDGLEGNSAPNVGTDKAADVGASDKNSPMDCDPDDAVTEAGNVLEERNGTRDAQAASTSGKSVRCAVFKEDVHTAIMDGKEIEVSFDNFPYYLSENTKNVLIAACVIHLKHKDHAKYTTDLTTINPRILLSGPAGSEIYQEMLAKALAKYFGAKLLIFDSHLLLGGLSSKEAELLKDGFNAEKSCSCAKQSPTATDIASSIDPSASETDTPSPSNAPASYGLESQPKLETDSAPSNSGTAKNCLFKLGDRVKYSCSSSGGLYQTSSSRGPPNGSRGKVVLLFDDNPLSKIGVRFDKPIPDGVDLGGVCEGGQGFFCNVTDLRLENSGIEELDKILINTLFEVVFSESRNAPFILFMKDAEKSIVGNGDPYSFKSRLEGLPDNVVVIGSHTQTDSRKEKSHPGGLLFTKFGSNQTALLDLAFPDSFGRLHDRGKEVPKPNKTLTKLFPNKVTIHMPQDEALLASWKQQLDRDVETLKIKGNLHHLRTVLSRCGMECEGLETFCIKDQTLTNENAEKIIGWALSHHLMQNAEVGPDAKLVLSCDSIQYGIGILQAIQNESKSQKRSLKDVVTENEFEKRLLADVIPPSDIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERVLVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILKVILAKEDLSSDIDLGAIASMTDGYSGSDLKNLCVTAAHRPIKEILEKEKKEQAAALAEGKPAPALSGSADIRSLNMEDFKHAHQQVCASVSSESVNMTELLQWNELYGEGGSRVKKALSYFIVAGDGLAHLFVWMNHLRFTFEAEVQTYTD* 1348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00791 1347 ProSitePatterns AAA-protein family signature. 1157 1176 IPR003960 GO:0005524|GO:0016887
Rops10g00791 1347 Coils Coil 91 112 - -
Rops10g00791 1347 Gene3D - 1186 1280 - -
Rops10g00791 1347 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1013 1294 IPR027417 -
Rops10g00791 1347 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 491 1317 - -
Rops10g00791 1347 MobiDBLite consensus disorder prediction 97 116 - -
Rops10g00791 1347 MobiDBLite consensus disorder prediction 392 455 - -
Rops10g00791 1347 MobiDBLite consensus disorder prediction 392 418 - -
Rops10g00791 1347 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 1012 1188 - -
Rops10g00791 1347 MobiDBLite consensus disorder prediction 97 216 - -
Rops10g00791 1347 CDD FHA 244 342 - -
Rops10g00791 1347 MobiDBLite consensus disorder prediction 619 660 - -
Rops10g00791 1347 Pfam ATPase family associated with various cellular activities (AAA) 1054 1183 IPR003959 GO:0005524|GO:0016887
Rops10g00791 1347 SMART AAA_5 1050 1187 IPR003593 GO:0016887
Rops10g00791 1347 SUPERFAMILY SMAD/FHA domain 220 341 IPR008984 GO:0005515
Rops10g00791 1347 Pfam AAA+ lid domain 1207 1242 IPR041569 -
Rops10g00791 1347 Pfam FHA domain 263 332 IPR000253 GO:0005515
Rops10g00791 1347 CDD RecA-like_ATAD1 1017 1183 - -
Rops10g00791 1347 Gene3D - 241 350 - -
Rops10g00791 1347 Gene3D - 1012 1293 IPR027417 -
Rops10g00791 1347 MobiDBLite consensus disorder prediction 119 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00791 Rops-Chr10 18438276 18464270 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00791 1013 1265 Calmodulin-binding Proteins AT3G56690 41.154 7.39e-43 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00791 - - gmx:100780098 2038.08