Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00785 ATGGGGTTTCATGACTTGGTTTTGCTATTGTGTTCTGCTTGGTGTGTCTTTTATGTGGGTAGTTGCAATGCTCAGTTGCAATCCTCTCAAACCCAAGTGCTTCTCCAGTTGAAAAAACACTTGGAATACCCAAAACAACTGGAAATATGGAAAGATCGTTGGACAGACCTTTGCTCTATATCTTATTCTACTCAAGTGAATGTCACATGCAAGGACAATTTTGTCACTGAGCTCACCATCTTGGGTGATAAGCCAACCAAGGGAAGAGATTTTGATGGGTTTGCTATTCCAAATCAAACACTATCACAGAGTTTCTCCATGGACTCTTTTGTGGCTACTCTAGCCAGGTTAACTAGCTTGAGAGTTCTTCGTCTTGTTTCTTTGGGAATTTGGGGACCACTCCCTGATAGAATTCACAGACTTTATGCACTTGAACATTTGGACTTGAGTTCAAATTATCTTTATGGATCAATTCCTCCAAAGGTTTCCACAATGATGAACCTCCAAACTGTTAGATTGGGTGATAACTTCTTCAATGGTACCATCCCCACCTTGTTCAATTCATCAAGTCATCCTACAGTTCTGAGTTTGAAGAATAACAGGTTGAATGGTCCATTTCCACCATCAATCCTTAGTATCACAACCCTTGTTGAAATTGACATGTCAAGCAATCAAATATCAGGGAATTTGCAAGATTTAACTGGTTTGAGTAGCTTGGAACAGCTAGATTTAAGGGAAAATAGATTGGACTCTTCACTACCTGCAATGCCTAAAAGGTTGATAAGGATTTTCCTCAGCAGAAACTCATTCTCAGGTCAAATTCCAAAGCACTATGGTCAACTCAATAGGCTTCAGCAGCTTGATATTTCCTTCAATGCACTCACAGGCACTGCTCCTTCTGAACTTTTTTCTTTGCCCAACATTAGTTACTTGAATTTGGCATCCAACATGTTGAGTGGACCACTCCAAAATCACCTGAAATGTAGCAACCAACTTAGATTTGTTGACATATCAAACAATAGGTTAATGGGGGGCTTGCCTTCTTCTCTGAGCAATAAATCAGAAAATAGAGTAGTTAAGATTGATGGAAACTGTTTATCTGGGAGTTTGCAGCATCAGCATGCAGTATCCTACTGCACAGAGACTCATATGAAGAAAAAATCATACACTGTTGGAATTTTTGTTGGTGTTATTGTGGGAATTCTTGTTAGCATAGTGGTTTTGGCTTTGTGCATTGTTGTAACTTGTAAAAGGTATTACACTCGGGGAATATCAGAGCAGCACCTATTGCATAAAACAGTTCAAGATACCTATGCAGCAGGGTTCTCCTCTGAGCTTGTTACAAATGCAAGGTATGTTTCTGAAGCTGCAAAGTTAGGCAAAGAAGACTTACCCACATGTAGGTCTTATTCCTTGGAAGAGCTAAAGGAAGCCACAAATAACTTTGACAACTCTAATTTTATGGGTGAAAATATATATGGGAAGCTTTACAGAGGAAAACTGGAGAGTGGGATACCGGTTGTGATAAGGTGCCTACCTTTGTCAAAAAAATATTCAATTAGGAACTTCAAACTGAGGTTGGATTTGCTTGCAAAGCTTCGTCACCCTCAGTTGGTATCCCTGTTGGGGCACTGCATTGATGGTGTTGCAGGAGAGCAAAATGACTCAAATGTCTTTCTCATTTATGAATGTGTGTCAAATGGGAGTTTCAAGACTTATCTCTCTGGAAACAATTCTGGCAAGGTTTTTAATTGGTCAGAGCGATTGTCAGTTCTGATTAATATAGCTAAGGCTGTTCACTTCCTACACACTGGGATGATACCTGGTTTCTTCAAAAATCGACTTAAGATCAACAATATTTTGCTTAATGAGAATTGGATGGCAAAGTTGAGTGATTATGGATTGTCCATTATCTCAGAAGAAACTGAAGCAAGTGGGGTAAAAGGAGAAAGCCCTCATTCATGGCAAATGAAAAGGTTAGAGGATGATGTTTATAGCTTTGGATTCATAATACTCGAGGCACTTGTTGGACCTGCAGTATCTGCTAAAAGAGAAGCAGTTTTGCTGAATGAAATGGCATCTTTCAATAGTCAAGATGGCTGGAAACAGATTGTGGACCCAGTTGTGCAAGCTACTTGCTCTAGAGAATCTCTATTCATGGTGATCTCCATAACAAACAAGTGTATTTCTCCTGAGTCATGTAGTCGGCCATCAATCGAGGATGTCCTTTGGAACTTGCAGTATGCTTCTCAAGTTCAAGCAACAGCTGATGGGGATGAGAGAATTTGA 2289 0.398 MGFHDLVLLLCSAWCVFYVGSCNAQLQSSQTQVLLQLKKHLEYPKQLEIWKDRWTDLCSISYSTQVNVTCKDNFVTELTILGDKPTKGRDFDGFAIPNQTLSQSFSMDSFVATLARLTSLRVLRLVSLGIWGPLPDRIHRLYALEHLDLSSNYLYGSIPPKVSTMMNLQTVRLGDNFFNGTIPTLFNSSSHPTVLSLKNNRLNGPFPPSILSITTLVEIDMSSNQISGNLQDLTGLSSLEQLDLRENRLDSSLPAMPKRLIRIFLSRNSFSGQIPKHYGQLNRLQQLDISFNALTGTAPSELFSLPNISYLNLASNMLSGPLQNHLKCSNQLRFVDISNNRLMGGLPSSLSNKSENRVVKIDGNCLSGSLQHQHAVSYCTETHMKKKSYTVGIFVGVIVGILVSIVVLALCIVVTCKRYYTRGISEQHLLHKTVQDTYAAGFSSELVTNARYVSEAAKLGKEDLPTCRSYSLEELKEATNNFDNSNFMGENIYGKLYRGKLESGIPVVIRCLPLSKKYSIRNFKLRLDLLAKLRHPQLVSLLGHCIDGVAGEQNDSNVFLIYECVSNGSFKTYLSGNNSGKVFNWSERLSVLINIAKAVHFLHTGMIPGFFKNRLKINNILLNENWMAKLSDYGLSIISEETEASGVKGESPHSWQMKRLEDDVYSFGFIILEALVGPAVSAKREAVLLNEMASFNSQDGWKQIVDPVVQATCSRESLFMVISITNKCISPESCSRPSIEDVLWNLQYASQVQATADGDERI* 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00785 762 SMART LRR_typ_2 236 259 IPR003591 -
Rops10g00785 762 SMART LRR_typ_2 141 165 IPR003591 -
Rops10g00785 762 SMART LRR_typ_2 281 305 IPR003591 -
Rops10g00785 762 Gene3D Ribonuclease Inhibitor 259 395 IPR032675 -
Rops10g00785 762 Gene3D Phosphorylase Kinase; domain 1 444 563 - -
Rops10g00785 762 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 27 258 - -
Rops10g00785 762 SUPERFAMILY L domain-like 29 371 - -
Rops10g00785 762 Gene3D Transferase(Phosphotransferase) domain 1 565 760 - -
Rops10g00785 762 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 260 384 - -
Rops10g00785 762 ProSiteProfiles Protein kinase domain profile. 482 749 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g00785 762 PANTHER UNNAMED PRODUCT 112 677 - -
Rops10g00785 762 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 445 564 - -
Rops10g00785 762 Gene3D Ribonuclease Inhibitor 27 258 IPR032675 -
Rops10g00785 762 SUPERFAMILY Protein kinase-like (PK-like) 465 747 IPR011009 -
Rops10g00785 762 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 565 762 - -
Rops10g00785 762 Pfam Protein tyrosine and serine/threonine kinase 487 743 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00785 Rops-Chr10 18348038 18353431 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00785 9 694 Miscellaneous Gene Families AT5G14210 51.146 0.0 667
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Rops10g00785 PK_Tyr_Ser-Thr 2.6e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00785 - - gmx:100802978 1254.97