Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00735 ATGGCTGAGAAAATCCACCATTACCACCACCTCTTGCTATTTTCATTGTTGTCCCTTTTCTTCTCCATCCATGCCAGGCTCCATCTCCACCTTTCAGACTCAAAGACTCTCTCAGCTCTCCAGAAGGACCTTGGAGTCAAGGGTCAACCCGAAACAACCAACACCACCACCACTTCGTGTAACACGGAGGGCGTGTTCAGTGAGAGGAGGCACAACTCAAGCAAGAGGAATGTAGCTAAGTGGATTGTTGGGTTTTTGGGTGGGGCACTGGCTGGGACCATTTCTGGGCTCATATTTCCATTGCTGTTCAAGTTGGCTTCGGCTTTGGTTAAGAAAACTGTGGACTTGGCTTCCAAAGGAAGAGGAAAGGGCTCAAGCTTTACAACTTTTAGTTCATTGATTAAGAACCCTGGGGACTTGGCTTTCTTGCAGAAGGAAGAAGCGCTGGCTTCGTTGGAAATTATTGGAAGAGGTGGCTGTGGAGAAGTTTACAAAGCTGAATTACCAGGAAGTAATGGCAAAATGATTGCCATTAAGAAGATTCTTCAGCCTCCCAAGGATGCAATTGACTTGGCTGAAGAAGATAGTAAGCTTCTTCATATGAAAATGTGCGAAATCAAATCGGAGATTAACACGAATGGTCAAATTCGACACAGGAACCTTCTGCCACTGCTGGCTCACGTGTCTAGGCCTGATTGCCATTACCTTGTTTATCAATTCATGAAGAATGGAAGTTTGCAGGATGTGTTGAACAAAGTTGAAACGGGTGAAAGGGAGTTGGATTGGTTGTCAAGGCACAAGATTGCACTTGGTGTAGCAGCTGGACTTGAATACCTTCACATGAGTCATAGTCCACGTATAATTCATAGAGACATCAAGCCTGCAAATATTCTTCTTGATGATGATATGGAAGCTCGTATAGCAGATTTTGAGCTTGCAAAAGCAATACCAGATGCTTATACACACATCACAACCTCAATTGTAGTTGGCACCGTGGGATATATAGCACCAGAGTATCACCAGATACTCAGTTTACTGACAAGTGTGACATATACAGCTTTGGGGTTAGTCTTGGTGTCTTGGTGA 1086 0.4438 MAEKIHHYHHLLLFSLLSLFFSIHARLHLHLSDSKTLSALQKDLGVKGQPETTNTTTTSCNTEGVFSERRHNSSKRNVAKWIVGFLGGALAGTISGLIFPLLFKLASALVKKTVDLASKGRGKGSSFTTFSSLIKNPGDLAFLQKEEALASLEIIGRGGCGEVYKAELPGSNGKMIAIKKILQPPKDAIDLAEEDSKLLHMKMCEIKSEINTNGQIRHRNLLPLLAHVSRPDCHYLVYQFMKNGSLQDVLNKVETGERELDWLSRHKIALGVAAGLEYLHMSHSPRIIHRDIKPANILLDDDMEARIADFELAKAIPDAYTHITTSIVVGTVGYIAPEYHQILSLLTSVTYTALGLVLVSW* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00735 361 ProSitePatterns Serine/Threonine protein kinases active-site signature. 287 299 IPR008271 GO:0004672|GO:0006468
Rops10g00735 361 SUPERFAMILY Protein kinase-like (PK-like) 147 344 IPR011009 -
Rops10g00735 361 ProSiteProfiles Protein kinase domain profile. 149 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g00735 361 SMART serkin_6 149 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g00735 361 Gene3D Transferase(Phosphotransferase) domain 1 135 354 - -
Rops10g00735 361 FunFam Os07g0541700 protein 241 331 - -
Rops10g00735 361 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 47 343 - -
Rops10g00735 361 Pfam Protein kinase domain 152 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00735 Rops-Chr10 17722425 17724193 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00735 78 358 Receptor kinase-like Gene Family AT2G31880 65.480 8.46e-130 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Rops10g00735 Pkinase 1.2e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00735 - - gmx:100811980 415.231