Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00734 ATGGCTGGGAAAATCCACCACCACCGCCACCTCTTTATGTTTTCATTGTTGTCCATCTTTTTCTTCATCCATGCCAAACTAGATCTTCACCCTTCAGATTCAAAGACACTCTTAACTCTCCAAAAGGACCTCGGAGTCAACGGTCAACCTGAGACAACCAACACCACCACCTGCCACCCATGTAACATGGAGGGTGTGTTCTGTGAGAGAAGGCTTTCCAACAACGAAAGCTACATCCTCAGAATCACCAGGTTGGTGTTCAAAAACAAGAACCTTAATGGGGTGTTGTCCCCTGCCATAGGACACCTCACAGAGCTTAAACAACTCTCTCTTTCTAATAACCACCTCGTTGACCGAATCCCACCACAGATAGTTGACTGCAGAAAGCTTGAGATTCTGGAACTCTCAAACAATCTCTTCTCTGGCCAAGTCCCTTCTGAATTGTCCTCTCTTATTCGCCTTCGTGTCCTTGATGTCTCTTCAAATAAGCTTTCTGGAAACTTGAATTTCCTAAGGTATTTTCCCAACTTGGAAACTCTCTCTATAGCTGACAACCTCTTCACTGGGAGAGTCCCAGCTTCCATTCGTTCCTTTCGCAATTTGAGAAACTTCAACTTCTCTGGGAACCGTTTCCTTGAAGGTTCTTCTCTTCGACTGAACGAGAAGAATGAATATGAATATGAAAGTTTGGCATCATCAGATACTGTCCCCAAACGCTACAGCTTTGCTGAGAATTCGAATGAAAGAATTTCTCTTGCGCCAGCTCCATCATCCCGTAAGAAAAAACCCAGTGTTGCTGCAGCTCCTGGTCCAGCAGCTCCTGGTCCAGCAGTTCACCACCACAGGCACAAGAAAAGTAAGAGGAAACTAGCTGGGTGGATTCTTGGGTTTGTGGCTGGGGCATTTGCTGGGACTGTTTCTGGGTTCATATTTTCATTGCTGTTCAAGTTGGCTTTAGCTTTGATCAAGGGAAGAGGAAAAGGTTCAGGCCCTGCAATTTTTAGTCCCTTGATTAAGAATGCTGAGGATTTGGCTTTCTTGGAGAAGGAAGAAGGGTTGGCTTCTTTGGAAATCATAGGAAGAGGTGGCTGTGGAGAAGTTTACAAATCTGAATTACCAGGAAGTAATGGCAAAATGATTGCCATTAAGAAGATTATTCAGCCTCCCAAGGATGCAGTTGACTTGGCTGAAGAAGACAGTAAGCTTCTTCACAAGAAAATGCGCCAAATCAAATCAGAGATTAACACGGTTGGTCAAATTCGACACAGGAACCTTCTGTCCCTGCTGGCTCATGTGTCTAGGCCTGATTGCCATTACCTTGTTTATGAATTCATGAAGAATGGAAGTTTGCAGGATGTGTTGAACAAAGTTGAAACGGGTGAAGGGGAGTTGGATTGGTTGTCAAGGCACAAGATTGCACTTGGTGTAGCAGCTGGACTTGAATACCTTCACATGAGTCATAGTCCACGGATAATCCATAGAGACCTCAAGCCTGGAAATATTCTTCTTGATGATGATATGGAAGCTCGTATAGCAGATTTTGGGCTTGCAAAAGCAATACCAGATGCTCAAACACACATCACAACCTCAAATGTAGCTGGCACTGTGGGATATATAGCACCAGAGTATCACCAGATACTTAAGTTCACTGACAAGTGTGACATATACAGCTTTGGGGTTATCCTTGGTGTCTTGGTTATTGGAAAGTTGCCTTCAGATGAGTTCTTCCAGCACACTGAAGAAATGAGTTTGGTCAAGTGGATGAGAAAGGTGATGACTTCAGAAAATCCCAAGGAAGCAATTGATGCAAAACTTTTGGGTAATGGATATGAGGAACAGATGCTTCTAGTATTGAAGATTGCCTGCTTTTGCACAATGGATGATCCAAAGGAGAGGCCTAACAGTAAGGATGTTAGGTGTATGTTGTCCCAAATCAAGCACTGA 1944 0.4388 MAGKIHHHRHLFMFSLLSIFFFIHAKLDLHPSDSKTLLTLQKDLGVNGQPETTNTTTCHPCNMEGVFCERRLSNNESYILRITRLVFKNKNLNGVLSPAIGHLTELKQLSLSNNHLVDRIPPQIVDCRKLEILELSNNLFSGQVPSELSSLIRLRVLDVSSNKLSGNLNFLRYFPNLETLSIADNLFTGRVPASIRSFRNLRNFNFSGNRFLEGSSLRLNEKNEYEYESLASSDTVPKRYSFAENSNERISLAPAPSSRKKKPSVAAAPGPAAPGPAVHHHRHKKSKRKLAGWILGFVAGAFAGTVSGFIFSLLFKLALALIKGRGKGSGPAIFSPLIKNAEDLAFLEKEEGLASLEIIGRGGCGEVYKSELPGSNGKMIAIKKIIQPPKDAVDLAEEDSKLLHKKMRQIKSEINTVGQIRHRNLLSLLAHVSRPDCHYLVYEFMKNGSLQDVLNKVETGEGELDWLSRHKIALGVAAGLEYLHMSHSPRIIHRDLKPGNILLDDDMEARIADFGLAKAIPDAQTHITTSNVAGTVGYIAPEYHQILKFTDKCDIYSFGVILGVLVIGKLPSDEFFQHTEEMSLVKWMRKVMTSENPKEAIDAKLLGNGYEEQMLLVLKIACFCTMDDPKERPNSKDVRCMLSQIKH* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00734 647 ProSitePatterns Serine/Threonine protein kinases active-site signature. 491 503 IPR008271 GO:0004672|GO:0006468
Rops10g00734 647 Gene3D Phosphorylase Kinase; domain 1 345 444 - -
Rops10g00734 647 SUPERFAMILY L domain-like 47 213 - -
Rops10g00734 647 SMART serkin_6 353 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g00734 647 ProSiteProfiles Protein kinase domain profile. 353 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g00734 647 SUPERFAMILY Protein kinase-like (PK-like) 349 642 IPR011009 -
Rops10g00734 647 FunFam leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1 340 444 - -
Rops10g00734 647 FunFam Leucine-rich repeat receptor-like protein kinase 445 647 - -
Rops10g00734 647 Gene3D Ribonuclease Inhibitor 32 169 IPR032675 -
Rops10g00734 647 Gene3D Ribonuclease Inhibitor 170 225 IPR032675 -
Rops10g00734 647 Pfam Leucine rich repeat 105 164 IPR001611 GO:0005515
Rops10g00734 647 Pfam Protein kinase domain 356 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g00734 647 Gene3D Transferase(Phosphotransferase) domain 1 445 647 - -
Rops10g00734 647 MobiDBLite consensus disorder prediction 252 282 - -
Rops10g00734 647 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 78 646 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00734 Rops-Chr10 17694230 17696442 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00734 14 647 Receptor kinase-like Gene Family AT2G31880 62.500 0.0 808
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Rops10g00734 Pkinase 3.3e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00734 - - gmx:100811980 954.51