Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00720 ATGGCTCTTCTACCATCACTAGTTCTAAAGCAATTGCCATATGAGATAAATTCAACCCATTACTTAACCATTTCCTTCTGTTTCTTCATAAGCCTCCTTTTTATGTTTCTTAAGCTGAAAAGAAGAAACAAGTCTAATTTGCCTCCTTCACCACCAAAGCTACCCATCATTGGTAATCTTCATCAATTAGGCACACTTCTACACCGTTCCTTCCATGCACTCTCTCTCAAGTATGGCCCTCTCATGATGCTGAACTTGGGTCAAACTCCAGCTCTTGTGGTTTCATCAGTAGATGTGGCCAAAGAAATATTCAAAACCCATGATGTTGTTTTCTCCAACAAGCCCCAAACAACAGCTGGGAGAATCATTCTCTATGGATGCACTGACTTGGCTTTTGCACCCTATGGAGAAGAGTGGAGACAAAAAAGGAAGATCTGTGTTCTAGAGCTTCTAAGCTTGAAAAGGGTGCAATCCTTTCACTACATTCGAGAAGAAGAAGTATCAGAATTGGTTGACAAAATAAGGGAAGCATGTGTGAGTAAAAGGTCATCTTTGAATCTGAGTGAGTTGATTATTGCAACATCAAACAACATAGTGTCAAGGTGTGTTCTTGGACAAAAGTATGATACCCCAAATGGTAGTGGCAGCTTTGGAGAGATTGGAAGGAAACTGATGAAACAATTAGCAGCTTTTAGTGTGGGAGATTTCTTTCCTTCTTTAGGTTGGATTGACATTCTTACAGGGCAGATTTCAGAGTTTAAGGCCACTTTTTCTGCATTGGATGCTTTCTTTGATCAGGTAATTGCAGATCATAAGAAAATGAAGAGGGGTGATGATGACCAATCAGATAATAAAAGCTTCGTGGAGATACTCCTTCAAGTTCAAGAGGGTGAAAAGCATGATTTTCAGCTCACCCATGATAACGTCAAAGCAATCTTAATGGATATGTTTACTGGAGCAAGTGATACTACTTCAACACTTTTGGAATGGACATTTGCAGAGCTCATGAAGAATCCAAATACCATGAAGAAAGCCCAAGAAGAAGCAATTCAGAGGGACCCTGAATTTTGGGACAGGCCTGAAGAGTTCCTTCCTGAGAGATTTGAAGAACAAAATTTCAAAGGACAAGATTTCCAATTCATTCCCTTTGGTTCTGGCAGAAGGGGATGTCCTGGAATTGCATTTGGGCTTGCTTCCACTGAGTTTGAGCTTGCTAATCTCCTGTATTGGTTTGATTGGAAGCTTCCTAAGATTGGTGTACCTGTGCAAGACATAGACATGAATGAGATATATGGGCTCACTGTCAGCAAGAAAGTACCACTTCATCTTGAACCTACACTATATTCATTTGAATCTAAACCTTGA 1365 0.4015 MALLPSLVLKQLPYEINSTHYLTISFCFFISLLFMFLKLKRRNKSNLPPSPPKLPIIGNLHQLGTLLHRSFHALSLKYGPLMMLNLGQTPALVVSSVDVAKEIFKTHDVVFSNKPQTTAGRIILYGCTDLAFAPYGEEWRQKRKICVLELLSLKRVQSFHYIREEEVSELVDKIREACVSKRSSLNLSELIIATSNNIVSRCVLGQKYDTPNGSGSFGEIGRKLMKQLAAFSVGDFFPSLGWIDILTGQISEFKATFSALDAFFDQVIADHKKMKRGDDDQSDNKSFVEILLQVQEGEKHDFQLTHDNVKAILMDMFTGASDTTSTLLEWTFAELMKNPNTMKKAQEEAIQRDPEFWDRPEEFLPERFEEQNFKGQDFQFIPFGSGRRGCPGIAFGLASTEFELANLLYWFDWKLPKIGVPVQDIDMNEIYGLTVSKKVPLHLEPTLYSFESKP* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00720 454 CDD CYP71-like 77 441 - -
Rops10g00720 454 SUPERFAMILY Cytochrome P450 48 445 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00720 454 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 26 448 - -
Rops10g00720 454 PRINTS E-class P450 group I signature 99 120 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00720 454 PRINTS E-class P450 group I signature 380 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00720 454 PRINTS E-class P450 group I signature 194 212 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00720 454 PRINTS E-class P450 group I signature 390 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00720 454 PRINTS E-class P450 group I signature 346 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00720 454 PRINTS E-class P450 group I signature 75 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00720 454 Gene3D Cytochrome P450 350 442 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00720 454 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 383 392 IPR017972 GO:0005506|GO:0016705
Rops10g00720 454 Pfam Cytochrome P450 48 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00720 454 Pfam Cytochrome P450 349 421 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00720 454 Gene3D Cytochrome P450 39 349 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00720 Rops-Chr10 17506448 17508473 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00720 349 442 Cytochrome P450 AT3G48320 37.113 3.65e-14 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00720 K20617 - gmx:100792382 432.95