Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00719 ATGATTGAAAGAAGAATGGCTTTACATCTACCATCATTTCTGAAACAAGTGCCTTATGATATAAATGCCACCCTTTTCATGTTTCTTTTCTTCTTCATCAGCATGTTGCTGTTGTTTAAGCTCACAAGGAAAAGAAAATGGAATCTACCTCCATCTCCACCTAAATTACCAATAATTGGAAATTACCATCAATTAGGAACACTGCCCCATCGTTCTTTTCAAGCACTCTCACAAAAGTACGGTCCTCTAATGTTGTTGAAGTTGGGCCAGCTTCCCCTTTTGGTGGTGTCCTCAGTAGACATGGCCAGAGAAGTGATGCAAACCCATGATGTAGTTTTTGCAAGCAGGCCCCACCTCACAGCAACAAAAGCCTTAGTCTATGGATGTAAAGACGTTGCTTTTGAATCCTATGGTGAAAACTGGAGGCAGAAAAGGAAACTCTGTGTGCTTGAATTACTGAGCCTGAAAAGGGTGCAATCAATTAAGTTCATCAGAGAAGAGGAAGTTGCGGTATTGGTTGATAAGATACGTGAAGCTTGCATGATGAGTAATGCTGGTTGCACTGTGAACCTCAGTGAGATGCTGATTACCACCGCAATTAACATAGTAAGTAGATGTATGTTTGGAAGGAAATATGATTCTGAAGGTTGCAGATTCGGAGAGCTTGTGAGGAAGGCGATGACTCAAGTTTCAGATTTCAATGTGGGAGATATGTTTCCTTTATTGGGTTGGATTGACATTCTCACTGGCCAAATTCAAAAATATAAGGCCACTTTTGAAGCATTGGATGCTTTCTTTGATCATGTAATTGCACAGCATAAGATGGAAACGAGGGATTATGAGAAGAGAGACTTTGTTGGCTCTCTGCTTCAACTCCAGGAGGGCGGTATGTCAGAGTTCGAGCTCACACAAGATGACTTCAAAGCACTCATAATGGACATGTTTCTGGGAGGAAGTGATACAACTTCAACAACAGTAGAATGGTCTGTGGCAGAGCTTGTGAAAAGTCCAAGTACAATGAAGAAAGCCCAAGAGGAGGTAAGAAGAGTTGTAGGGAATAAGCCAAAAATAGAGGACAATGATGTCAATCAAATGGGGTACTTGAAATGTGTAGTCAAAGAAACCTTGAGGTTACATCCAGCTGCACCTCTTTTAGATCCTAGAGAATCAAGATCTAGTGTTAAACTAGGAGAGTATGATATTCCTGATAAAACAATGGTATATGTGAATGCATGGGCAATTCAAAGGGACCCTGAATTTTGGGAAAGCCCTGAAGAGTTTATACCAGAGAGATTTGAAAATAGCAAGGTTAATTTCAATGGTCAAGACTTTCAATTTATCCCATTTGGCTCTGGGAGAAGAAAATGTCCTGGTATGGCGTTTGGACTTGCTTCTGTGGAGTATATGCTTGCTAATTTTTTATATTGGTTCGATTGGAAGCTACCTACAAATGTTCAAGAGGTAGACATGAGTGAGAAATATGGGCTCACTGTCAACAAGAAAGTACCTCTCTATCTAGAGCCAATACCATACAATTTCTAG 1542 0.404 MIERRMALHLPSFLKQVPYDINATLFMFLFFFISMLLLFKLTRKRKWNLPPSPPKLPIIGNYHQLGTLPHRSFQALSQKYGPLMLLKLGQLPLLVVSSVDMAREVMQTHDVVFASRPHLTATKALVYGCKDVAFESYGENWRQKRKLCVLELLSLKRVQSIKFIREEEVAVLVDKIREACMMSNAGCTVNLSEMLITTAINIVSRCMFGRKYDSEGCRFGELVRKAMTQVSDFNVGDMFPLLGWIDILTGQIQKYKATFEALDAFFDHVIAQHKMETRDYEKRDFVGSLLQLQEGGMSEFELTQDDFKALIMDMFLGGSDTTSTTVEWSVAELVKSPSTMKKAQEEVRRVVGNKPKIEDNDVNQMGYLKCVVKETLRLHPAAPLLDPRESRSSVKLGEYDIPDKTMVYVNAWAIQRDPEFWESPEEFIPERFENSKVNFNGQDFQFIPFGSGRRKCPGMAFGLASVEYMLANFLYWFDWKLPTNVQEVDMSEKYGLTVNKKVPLYLEPIPYNF* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00719 513 Pfam Cytochrome P450 50 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00719 513 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Rops10g00719 513 Gene3D Cytochrome P450 36 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00719 513 PRINTS E-class P450 group I signature 198 216 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00719 513 PRINTS E-class P450 group I signature 369 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00719 513 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00719 513 PRINTS E-class P450 group I signature 77 96 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00719 513 PRINTS E-class P450 group I signature 410 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00719 513 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00719 513 PRINTS E-class P450 group I signature 101 122 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00719 513 PRINTS E-class P450 group I signature 306 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00719 513 PRINTS E-class P450 group I signature 326 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00719 513 SUPERFAMILY Cytochrome P450 50 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00719 513 CDD CYP71-like 79 504 - -
Rops10g00719 513 PANTHER CYTOCHROME P450 71B11-RELATED 34 509 - -
Rops10g00719 513 FunFam Cytochrome P450 83B1 37 507 - -
Rops10g00719 513 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00719 513 PRINTS P450 superfamily signature 317 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g00719 513 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00719 Rops-Chr10 17500894 17503362 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00719 31 509 Cytochrome P450 AT5G25180 43.827 3.40e-147 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00719 K20617 - gmx:100803922 612.453