Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00711 ATGCCGGCGAATTCCTTGGAGAAAGACGACAATACCGAAACCGAGTTCGCCGAGATTGATCCTACCGGTCGTTATGGTCGGTACAAGGAAGTTTTAGGGAAGGGAGCTTTCAAGAAAGTATACCGAGCATTTGATGAGTTGGAAGGAATTGAAGTGGCTTGGAATCAGGTTAAGGTGGCTGATCTATTGCGTAAATCTGAAGATTTGGAGCGTCTTTATTCAGAAGTTAATTTGCTCAAGACTTTGAAGCATAAGAATATAATTAAACTTTACAATTCATGGATTGATACCAAGAATGAGAATATCAACTTCATTACTGAAATTTTCACCTCAGGAACATTGCGCCAATACCGGAAGAAACATAAGCATGTTGATTTGAGAGCTTTGAAGAAATGGTCTAGGCAGATTTTGGAGGGCCTTGCATACCTTCACAGTCATAATCCACCAGTTATTCATCGAGACCTTAAGTGTGACAACATTTTTGTCAATGGGAATCAAGGGGAGGTGAAAATTGGTGATTTAGGATTGGCAGCCATCCTTCAACAGGCCAATGCAGCTCACAGTGTTATAGGTACCCCAGAGTTCATGGCCCCGGAACTTTATGAAGAGGATTATAACGAGCTTGTTGACATTTATGCTTTTGGCATGTGCTTGCTAGAGTTGGTAACCGTTGAATACCCATATGTTGAATGTGCCAATGCTGCTCAAATATACAAGAAAGTGACATCTGGAATAAAGCCAGCATCATTGACAAAAGTGACAGATCTTGAAGTTAAAGCTTTTATAGAAAAGTGCATCGATCGTGTATCGGAACGGTTGCCTGCAGAGGATCTCTTGATGGATCCCTTTCTTCAGACAGATTATGATAGTGAAAGTGTAGGTCGATCTTCAAGAACTGGAACCCATCATACAGGAAATATTTGTGATAATCAAGCCGTTGGAAAAAGTGCCGTGGATAATTCTGTTGAGACAAGTAGGGAATTCACAGTGGAAGGTCAGAGGAGAGATATTAATACAATATTTTTAAAACTGCGAATTGCAGATTCCTCAGGTCATATTCGCAATATCCATTTCCCCTTTGATACTGGAGCGGACACTTCAATCTCTGTTGCTGGTGAAATGGTTGAGGAGTTGGAACTTTCTGATCAAGATGTTTCGACTGTTGCTAAGATGATTGACTCAGAAATTCAACATCACATTCCTAGTTGGAATCCCAGTGAAACTCCTGTCAGTAATTCTTGTCATGATGAAGGCTGTGCCTCTGAAACAAGGCCTGAGGCTTCTCCTATGGGAAATGATTCTATCAGTTCTCCTGGCAATCTTGCCTTAGAAACATTACCTTCAGGTCGTAAGTACTGGTCAGACTCTCCATCTCTGCATGGTGCTCCAAACTTGTCTGATGCAGTGGGTGTGAATGCTGAGGAAGGCAGCTTGACTGCAGATAGTGCTGAGAAGGAATGTGATGGAGCTGCTGATTCCCCTTTTAGTGAGAGAAGTAGTACATCTGTGCATTCAGAACCAACCGGTGAAAAATCTTCTCGGGAAGAAATATCTGGAAGTTTGGAAGATCCTGAAATGGAATACGTCAGTAAAATAGCAATAGAACTGGAGAATTTGTTGGTTAAGCAAAGAGAGGAGTTAGATGAACTAAAGAGGAAGCACAAATTAGCTGTCTCAGATCTTTTGAAGGAACTTTCTCCAGAAAAGTGCCAAAAGGTCCTCAATATATGCAGCCTGCAGATCCCTAACGGTGAAATGTAG 1761 0.4157 MPANSLEKDDNTETEFAEIDPTGRYGRYKEVLGKGAFKKVYRAFDELEGIEVAWNQVKVADLLRKSEDLERLYSEVNLLKTLKHKNIIKLYNSWIDTKNENINFITEIFTSGTLRQYRKKHKHVDLRALKKWSRQILEGLAYLHSHNPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILQQANAAHSVIGTPEFMAPELYEEDYNELVDIYAFGMCLLELVTVEYPYVECANAAQIYKKVTSGIKPASLTKVTDLEVKAFIEKCIDRVSERLPAEDLLMDPFLQTDYDSESVGRSSRTGTHHTGNICDNQAVGKSAVDNSVETSREFTVEGQRRDINTIFLKLRIADSSGHIRNIHFPFDTGADTSISVAGEMVEELELSDQDVSTVAKMIDSEIQHHIPSWNPSETPVSNSCHDEGCASETRPEASPMGNDSISSPGNLALETLPSGRKYWSDSPSLHGAPNLSDAVGVNAEEGSLTADSAEKECDGAADSPFSERSSTSVHSEPTGEKSSREEISGSLEDPEMEYVSKIAIELENLLVKQREELDELKRKHKLAVSDLLKELSPEKCQKVLNICSLQIPNGEM* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00711 586 Coils Coil 533 560 - -
Rops10g00711 586 MobiDBLite consensus disorder prediction 400 440 - -
Rops10g00711 586 FunFam Probable serine/threonine-protein kinase WNK3 338 429 - -
Rops10g00711 586 MobiDBLite consensus disorder prediction 400 418 - -
Rops10g00711 586 Gene3D - 338 428 - -
Rops10g00711 586 CDD STKc_WNK 24 284 - -
Rops10g00711 586 SMART serkin_6 26 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g00711 586 Gene3D Phosphorylase Kinase; domain 1 10 107 - -
Rops10g00711 586 ProSitePatterns Serine/Threonine protein kinases active-site signature. 150 162 IPR008271 GO:0004672|GO:0006468
Rops10g00711 586 FunFam probable serine/threonine-protein kinase WNK9 109 289 - -
Rops10g00711 586 SUPERFAMILY Protein kinase-like (PK-like) 28 285 IPR011009 -
Rops10g00711 586 Gene3D Transferase(Phosphotransferase) domain 1 109 291 - -
Rops10g00711 586 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 8 559 - -
Rops10g00711 586 Pfam Protein kinase domain 29 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g00711 586 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 342 396 IPR024678 GO:0004674|GO:0005524
Rops10g00711 586 FunFam Probable serine/threonine-protein kinase WNK1 10 107 - -
Rops10g00711 586 ProSiteProfiles Protein kinase domain profile. 26 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g00711 586 MobiDBLite consensus disorder prediction 478 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00711 Rops-Chr10 17427717 17433440 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00711 102 574 MAP Kinase Kinase Kinase AT3G48260 55.417 2.22e-169 486
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Rops10g00711 Pkinase 5.1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00711 K08867 - gmx:100301899 837.025
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g00711 10 17427717 17433440 Rops10g00711 10 17427717 17433440 ECH