Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00698 ATGGAATCTAAACCTAACAACACTATCAAGCTTCTCTGTAGCTACGGCGGCAAGATCCTTCCACGCGCCACCGACGGCGAGCTTCGTTACGTCGGCGGTCACACTAGAGTACTCGCCGTTGATCGTTCTATTTCCTTTTCAGAATTGATGGTGAAACTTGGAGAGTTGTGCGGTTCTTCTGTAACCTTGAGGTGTCAATTGCCGGAAGGAGACCTAGAAACCTTGATCTCTGTCAAAAACAAGGAAGATTTGGCGAACATAATCGAGGAATACGATTGTGCATCGTCGAAATTGACTCATCCGTTGAAGATCAGAGCCATTCTTTCGCCGCCAAAATCGATCAAGAAAGTTTCTTCTGTTCCGTCGTCGTCTTCTTCCAGTGCTAGTCGCTCTCCGTCCAGATCGCCTCACACATCATCTGAATCGCTGCCGTACGCGGTGGCGTATCGCAACGGCCGTTACAACCGCTCGCCGCCGGCGACGGTACGGTATCCGATCGGCGTCCGTAACGGTTCGGTGAAAGCTTGTTGCTACATGGGCCGGTTCGAGGGAAGCCCAAGGTTCCTCAATTGTGGGCTGGGGCCTCACTGCAACAATTATTGCCACTGA 609 0.5156 MESKPNNTIKLLCSYGGKILPRATDGELRYVGGHTRVLAVDRSISFSELMVKLGELCGSSVTLRCQLPEGDLETLISVKNKEDLANIIEEYDCASSKLTHPLKIRAILSPPKSIKKVSSVPSSSSSSASRSPSRSPHTSSESLPYAVAYRNGRYNRSPPATVRYPIGVRNGSVKACCYMGRFEGSPRFLNCGLGPHCNNYCH* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00698 202 MobiDBLite consensus disorder prediction 115 142 - -
Rops10g00698 202 SMART PB1_new 23 111 IPR000270 GO:0005515
Rops10g00698 202 PANTHER OS05G0427100 PROTEIN-RELATED 3 143 - -
Rops10g00698 202 Pfam PB1 domain 27 97 IPR000270 GO:0005515
Rops10g00698 202 Gene3D - 29 108 - -
Rops10g00698 202 CDD PB1_UP2 12 108 - -
Rops10g00698 202 MobiDBLite consensus disorder prediction 114 142 - -
Rops10g00698 202 SUPERFAMILY CAD & PB1 domains 25 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00698 Rops-Chr10 17159157 17160211 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00698 9 96 MAP Kinase Kinase Kinase AT5G57610 50.000 5.68e-25 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00698 - - vra:106761207 246.128
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g00698 10 17159157 17160211 Rops10g00698 10 17159157 17160211 ECH
Rops2g04059 2 74027659 74037431 Rops10g00698 10 17159157 17160211 PCT