Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00661 ATGCAGAGCGCGGCTTTCACTTCTCTCTCTCCTTCCCTCCCTCTCCGCAACCTCAACCACCACAACAACAATCGTTTGAGACCTTCCCTTCGCGTTCGTCTTTCTTCTGAAAGCGCAAATCTCAATGGCGTTTCTTCTTCTTCTTCTTCCTCTTCTTTCACGCGTCGATCGTGGTCACTCTCTCCTTCCTCTTCTTTCAAGTTCAGACCTCTCCCTCTCGATCCTTCTCCTCCTAGAGCCGCTTCCGTCTCTGATAGCGCCGGCTCTGAAGATTCCGGTTCCTCCTTATTCAAAACTCTCCAGCTTGGTTCCTTGTTTGGCCTCTGGTACCTCTTCAACATCTACTTCAACCTTTACAACAAACAGGTTTTGAAGGCGTACCATTTCCCGATAACTGTGACTGCAATTCAGTTTGCTGTTGGTTCTGTCGTTGTATCGTTGATGTGGGGTTTAAATCTCTATAGGAGACCGAAAATCAGTGGGGCACAGCTTGCAGCGATACTGCCACTTGCTGTTGTGCATACTTTGGGGAACCTTTTCACTAATATGAGCCTTGGAAAGGTGGCTGTGTCATTCACTCACACAATCAAAGCTATGGAGCCTTTCTTTTCAGTGCTCCTCTCTGCCCTGTTCCTTGGAGAGAAGCCTACGCCTTGGGTGATTGGTGCCCTTGCGCCCATCGTTGGTGGAGTTGCATTGGCATCTGCTACTGAGGCATCTTTCAATTGGGCTGGGTTTTTGAGTGCAATGGCTTCCAATGTGACATTTCAATCTCGAAATGTTCTTAGCAAAAAGGTCATGGTTAAGAAAGAGGAATCAATGGACAACATAATTCTCTTCTCTATAATAACAATAATGTCCTTCTTCTTGTTAGCACCTGTGGCTGTCTTCATGGAGGGTGTCAAATTTACCCCTGCTTACCTGCAATCTGCTGGCATAAATGTTAGACAACTGTACACCAGATCCCTTATTTCTGCACTCTGTTTCCACGCATATCAGCAAGTTTCTTACATGATATTGCAGAGGGTATCACCTGTTACCCACTCCGTGGGCAATTGTGTGAAGCGGGTGGTGGTCATTGTGAGCTCTGTAATCTTCTTCCAAACACCTGTCTCTCCTGTGAATGCTATTGGGACTGCTATAGCTCTTGCTGGTGTTTTCCTCTATTCAAGGGTGAAGCGAATTAAGCCAAAGACAGCTTAA 1203 0.4647 MQSAAFTSLSPSLPLRNLNHHNNNRLRPSLRVRLSSESANLNGVSSSSSSSSFTRRSWSLSPSSSFKFRPLPLDPSPPRAASVSDSAGSEDSGSSLFKTLQLGSLFGLWYLFNIYFNLYNKQVLKAYHFPITVTAIQFAVGSVVVSLMWGLNLYRRPKISGAQLAAILPLAVVHTLGNLFTNMSLGKVAVSFTHTIKAMEPFFSVLLSALFLGEKPTPWVIGALAPIVGGVALASATEASFNWAGFLSAMASNVTFQSRNVLSKKVMVKKEESMDNIILFSIITIMSFFLLAPVAVFMEGVKFTPAYLQSAGINVRQLYTRSLISALCFHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVIFFQTPVSPVNAIGTAIALAGVFLYSRVKRIKPKTA* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00661 400 PANTHER SOLUTE CARRIER FAMILY 35 101 394 - -
Rops10g00661 400 SUPERFAMILY Multidrug resistance efflux transporter EmrE 314 394 - -
Rops10g00661 400 MobiDBLite consensus disorder prediction 69 94 - -
Rops10g00661 400 Pfam Triose-phosphate Transporter family 100 390 IPR004853 -
Rops10g00661 400 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 100 398 IPR004696 GO:0016020|GO:0022857|GO:0055085
Rops10g00661 400 SUPERFAMILY Multidrug resistance efflux transporter EmrE 147 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00661 Rops-Chr10 16332425 16336753 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00661 1 398 Antiporters AT5G33320 69.082 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00661 K15283 - gmx:100804563 547.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04018 2 73494136 73497661 Rops10g00661 10 16332425 16336753 ECH
Rops10g00661 10 16332425 16336753 Rops10g00661 10 16332425 16336753 ECH
Rops2g04018 2 73494136 73497661 Rops10g00661 10 16332425 16336753 PCT