Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00659 ATGGAAGAAACATTTGTTCCCTTCCGCGGGATTAAGAATGACCTCAAAGCAAGAATTATGTGCTACAAACAAGATTGGACCAGTGGATTCCGAGCTGGTATGAGGATCCTTGCCCCAACTACATACATATTTTTTGCTTCAGCAATTCCTGTTATTTCTTTCGGGGAGCAACTGGAAAGAAGTACTGATGGAACTCTCACTGCTGTGCAGACTCTTGCATCAACTGCACTCTGTGGTATTATCCACTCAATCATCGGAGGGCAGCCTCTCCTCATACTTGGTGTAGCTGAGCCAACAGTTCTAATGTATACATTCATGTATAACTTTGCGAAGGATCGAAAGGATTTGGGACACAAACTATTCCTGCCTTGGACTGGATGGGTGTGTGTTTGGACTGCCTTGTTGCTCTTCTTGCTGGCCATTCTTGGTGCTTGCTCCATAATCAACAGATTCACACGCCTTGCTGGTGAACTATTTGGTCTGCTAATTGCAATGCTATTTATGCAGCAGGCTATAAAGGGACTTGTGGAAGAGTTTGGTGTACCCAAGACCCAGACAGAAGGTACCAATCAGCTTGCACTCCAATCCTCTTGGCTGTTTGGCAATGGAATGTTTGCTTTAGTTTTGTCATTCGGCCTTCTTTTTACTGGTCTAGAAAGCCGCAAGGCTAGATCGTGGCGTTATGGGACAGGTTGGCTACGGGGAATTATAGCTGATTACGGAGTCCCACTAATGGTTCTCTTGTGGACTGCTGTGTCTTACATACCAGTCAATAAGGTTCCAAGGGGAATCCCTAGGAGACTTTTCAGTCCAAACCCTTGGTCTCCTGGTGCATACTCAAATTGGACTGTTGTCAAGGAAATGTTGAATGTGCCTCCCTTATACATTGTTGGAGCATTTATACCCGCAACTATGATTGCTGTGCTTTACTACTTTGATCACAGTGTTGCATCACAACTCGCGCAGCAGAAGGAGTTCAATCTAAGAAAACCCTCATCTTATCATTATGACTTGTTACTCCTGGGCTTTTTGACCATACTGTGTGGGCTTATTGGAATCCCTCCTTCCAACGGTGTGATTCCACAATCTCCAATGCATACGAAGAGCTTAGCTACTCTAAAGCATCAGCTTTTACGGCATAAGCTTGTATCTACTGCAAGAAACAGCATGCGGAAAAATATGAACCTTGGTCAGTTATACCAGAGTATGAAAGAAGCGTATGATGCAATGCAGACACCATTGGTTCCCCAAATGCCACCCACCTTGGGGCTGAAAGAGCTGAAGGAATCTACCATTACACTGGCTTCAAGTCATGGATACATTGATGCCCCTGTTGACGAGGTTGTCTTTGATGTGGATAAGGATGTTGATGACCTTTTGCAAGTTGAAGTTAAAGAGCAGCGCCTCAGCAATCTACTGCAGGCATTGATGGTTGGGGCTTGTGTTGCTGCTATGCCTCTTTTGAAGAAGATACCAACTTCAGTGCTTTGGGGTTACTTTGCCTTCATGGCAATTGAAAGCCTGCCAGGAAATCAGTTTTGGGAGAGAATATTGTATCTTTTCACTGCTCCTAGTCGAAGATACAAACTGCTGGAGAAACACCATGCCACCTTTGTTGAGACTGTGCCCTTGAAAGCAATTGCCATGTTTACTTTGTTCCAGACAGCTTACTTGCTTCTTTGCTTTGGCATAACCTGGATACCACTTGCTGGGGTCCTTTTCCCATTGTTAATCATGCTTCTTGTCCCGGTCCGGCAATATTTTCTTCCCAAGTTTTTCAAAGGAGCCCATCTTCAAGAGTTGGATGCAGCAGCATATGAGGAAGCACCTGCCATTGCTTTCAACAGGTCCTTTGATGATCCAAGTAACCATGCAACAACAGTCAATATCAGTGGTGGGGAAATTCTTGATGAAATTATTACAAGGAGTCGTGGAGAGATCCGCCATACACCAAGCCCCAAAACATTAAGTTCATCTTCAACTTCAATAGGAGATATAAGACCTGCTAATAGTCCACAAATATCAAGAAGGATTCCTAGCCCTCGAGTATCTGAATTGAGAGGCGAAAGCAGCCTAGGAGGACCAAGTGGGAAGGAGATAAAGTTGATGCAAACTCCTAGTCCACGGCCATCAATTCTTGAAAAAGATAGCAATGGTTCACCTTCAAGCTAA 2172 0.4438 MEETFVPFRGIKNDLKARIMCYKQDWTSGFRAGMRILAPTTYIFFASAIPVISFGEQLERSTDGTLTAVQTLASTALCGIIHSIIGGQPLLILGVAEPTVLMYTFMYNFAKDRKDLGHKLFLPWTGWVCVWTALLLFLLAILGACSIINRFTRLAGELFGLLIAMLFMQQAIKGLVEEFGVPKTQTEGTNQLALQSSWLFGNGMFALVLSFGLLFTGLESRKARSWRYGTGWLRGIIADYGVPLMVLLWTAVSYIPVNKVPRGIPRRLFSPNPWSPGAYSNWTVVKEMLNVPPLYIVGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTILCGLIGIPPSNGVIPQSPMHTKSLATLKHQLLRHKLVSTARNSMRKNMNLGQLYQSMKEAYDAMQTPLVPQMPPTLGLKELKESTITLASSHGYIDAPVDEVVFDVDKDVDDLLQVEVKEQRLSNLLQALMVGACVAAMPLLKKIPTSVLWGYFAFMAIESLPGNQFWERILYLFTAPSRRYKLLEKHHATFVETVPLKAIAMFTLFQTAYLLLCFGITWIPLAGVLFPLLIMLLVPVRQYFLPKFFKGAHLQELDAAAYEEAPAIAFNRSFDDPSNHATTVNISGGEILDEIITRSRGEIRHTPSPKTLSSSSTSIGDIRPANSPQISRRIPSPRVSELRGESSLGGPSGKEIKLMQTPSPRPSILEKDSNGSPSS* 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00659 723 PANTHER ANION EXCHANGE PROTEIN 2 610 IPR003020 GO:0005452|GO:0006820|GO:0016020
Rops10g00659 723 Gene3D Helical hairpin bin 18 60 - -
Rops10g00659 723 MobiDBLite consensus disorder prediction 650 678 - -
Rops10g00659 723 MobiDBLite consensus disorder prediction 642 723 - -
Rops10g00659 723 Pfam HCO3- transporter family 204 375 IPR011531 GO:0006820|GO:0016020
Rops10g00659 723 Pfam HCO3- transporter family 462 552 IPR011531 GO:0006820|GO:0016020
Rops10g00659 723 Pfam HCO3- transporter family 7 182 IPR011531 GO:0006820|GO:0016020
Rops10g00659 723 FunFam probable boron transporter 2 18 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00659 Rops-Chr10 16301530 16307282 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00659 1 691 Antiporters AT3G62270 75.398 0.0 1054
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00659 K24194 - gmx:100793554 1253.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g00659 10 16301530 16307282 Rops10g00659 10 16301530 16307282 ECH