Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00638 ATGACAGCTTATGAAAGATCACGGATACTATTGCGCATTGCTGATTTGGTTGAGAAACATAGTGATGAACTAGCAGCAATAGAAACATGGAATAATGGAAAGCTTTATGAACAAGCTGGAAACATGACGTACCCATGTTCGGCAAATCATACCTTGAAACTTTCCTCTATTGTTGTGTTGCTTGGAAAGTTGGGCCTGCACTTAGAGCTGTCAATTAGGCGTCGGGCTTGGGTAGTAAAGACTGCTGAGCAAACACCTTTGACTGGTTTATTTGCAGCACAACTATTTCACGAGGGTGGTCTTCCCCCTGGAGTTCTCAATGTTGTGTCTGGTTTTGGTCCAACTGCTGGTTCTGCTCTTACTAGTCATATGGATGTGGACAAGCTAGCTTTCACTGGATCAACTGACATTGGAAAAAAAAAGTACCAATTGGCTGTTAAAAGCAATCTTAAGCCTGTGACATTGGAGCTTGGAGGAAAATCACCATTCATAGTGTGTGAGGATGCTGATGTTGACAAGGCTATAGAACTTGCACACTTTGCTCTGTTCTTTAATCAGGGTCAATGTTGTTGTGCCGGGTCACGTTCTTATGTGCATGAACGAATATATGATGAGTTGTTGGAGAAAGCAAAGGCAGCTGCTTTGAAACGTGTTGTTGGTGATCCATTCAAGAAAGGTGTGGAACAAGGTCCTCAGATTGATTCAGAACAGTTTGAGAAAATCCTCCTACACATCAAGTCAGGTGTTGAATGCAATGCTACTCTGGAATGCGGCGGTGAAAGAATTGGCACAAAAGGCTTCTTTGTCCAACCAACAGTCTTCTCAAATGTTCAGGGTGATATGGTGATAGCTCAAGATGAGATCTTTGGCCCAGTCAAACCATACTGA 888 0.4279 MTAYERSRILLRIADLVEKHSDELAAIETWNNGKLYEQAGNMTYPCSANHTLKLSSIVVLLGKLGLHLELSIRRRAWVVKTAEQTPLTGLFAAQLFHEGGLPPGVLNVVSGFGPTAGSALTSHMDVDKLAFTGSTDIGKKKYQLAVKSNLKPVTLELGGKSPFIVCEDADVDKAIELAHFALFFNQGQCCCAGSRSYVHERIYDELLEKAKAAALKRVVGDPFKKGVEQGPQIDSEQFEKILLHIKSGVECNATLECGGERIGTKGFFVQPTVFSNVQGDMVIAQDEIFGPVKPY* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00638 295 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 77 160 IPR016162 GO:0016491
Rops10g00638 295 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 183 194 IPR016160 GO:0016491
Rops10g00638 295 SUPERFAMILY ALDH-like 1 293 IPR016161 GO:0016491
Rops10g00638 295 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 161 292 IPR016163 GO:0016620
Rops10g00638 295 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 155 162 IPR029510 GO:0016491
Rops10g00638 295 FunFam Aldehyde dehydrogenase3 159 295 - -
Rops10g00638 295 Pfam Aldehyde dehydrogenase family 77 292 IPR015590 GO:0016491
Rops10g00638 295 Pfam Aldehyde dehydrogenase family 1 40 IPR015590 GO:0016491
Rops10g00638 295 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 1 48 - -
Rops10g00638 295 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 1 56 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00638 Rops-Chr10 15683222 15692311 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00638 1 293 Aldehyde Dehydrogenase Gene Family AT3G48000 62.500 1.17e-142 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00638 K00128 - csin:114262334 424.476