Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00632 ATGGCCAATTCAGAGGAAGAAGAGGTGAAGAAGGCCCTAGTCACATTCATGGATAAACTTGCACCAGCGAATGTACAAAGAGACTCCATGAGGGGTTGGAACCTCACATCAAATCCATGCACTGATAAGTGGCAAGGTGTGAGCTGCAATTCAGACAACCAATATGTGAAGAGTATAATTCTTGAGAACTTCAATTTCAGTGGTGTTGTAGATGCCAAATCTCTTTGCATGATAAAGTCCCTTCAAATCCTTAGCCTAAGGAACAACAATTTACATGGTTTGATATCAGAGGATATAGGAAATTGTAAGTTCTTAACTCACTTGGTTTTAAGTGGGAATAAATTCTCTGGTGATCTTCCTATCTCTATTGCCAAATTAAGTAACCTGAAGAGGCTTCATATCTCAGACAATTACTTCAGTGGAGAACTTCCAAACTTGGTTCATGTTACAAGCTTGATATCCTTTCTTGTTGAAAACAACAACTTCACTGGTGAAATTCCTGATTTTGACTTCTCCAATGTTGAAGCTTTTAATGTCTCCAACAACAATTTACATGGTCCTGTTCCTGATGTCAGAGGTAGATTCCATGCAGATAGCTTTCTGGGTAATCCTGATTTATGTGGAGAACCACTTTCAAATGCATGCCCACCTTCTCCACCTCCTTCTCCTCCACCACATGTAAAGAAAGACAAAAAATCATTTAATGATGATTTGCACATTTATTCAGGTTACATAATTCTTGGTTTAATTGTCCTTCTTTTTTTGAGCTACAAATTGTTAAGTAAATTCAAGAGCAAAGAGAGAGCATTAGATGCTGAGAATAAGGATGTGGCACAAGAAACTAGTGGTGACAAGGCTAGTGAAGCCTCCAATTCCAATGGATCAAAGAATTGGTTGAATGGCATTGGGATTAGATCTGAGTATTCTTTGACATCTGTGGAAAGTGGGATGACTACATCAGGTCTTGTTCTTCTTTCAAGTAGAAAACTTAGGGGAATGCAATTTGAGGACTTGCTTGGTGCTCCTGCTGAGTTGATCAGGAGAGGAAAGCATGGAAGCCTCTACAAGGTTATGCTCGATAATGGGGTGCTGTTGGCAGTCAAGAGGATCAAGGATTGGGGAATTTCAAAGCAAGAATTTGAGAGAAGGATGAATCTCATAGCTCAAGTAAAGCATCCACGTGTGATGCCACCTGTTGCATACTATTGCTCCCAGCAAGAGAAGCTCCTGGCTTATGAATATCTGCAGAATGGTAGCCTCTTCATGTTACTTTATGGATCTCAGAGTGGCCACTCTTTAGATTGGGGGAGCAGACTAAATGTTGCTGCTAAGATAGCTGCGGCCTTGGCATATATACATGAGGAGCTTCGTGAGAGTGGAATAGCACATGGAAACTTAAAATCAAGTAACATCTTGTTTGATAAGAATATGGATCCATGCATAAGTGAATATGGCCTAATGGTGGCTGAAAATCAAGTTCACAAAAGCCACAAAAACAAAAATCTGACTGCAGCCACCTTCAATGCTGATATATATGCCTTTGGTGTGATACTTCTGGAGCTGCTGACAGGGAAAGTAGTTAAAAATGATGGATTTGATCTGGTTAAATGGGTGAATTCAGTGGTCAGAGAAGAATGGACTGTTGAAGTTTTTGACAAGACCATAATCTCACAAGGTGCTTCTGAAGAAAGGATGATGAACTTGTTGCAAGTAGCAATAAAATGCATAAATCGTTCTCCAAATCAAAGGCCATGTATGAGTCAAGTTGCAGAGATGATAAATGCATTGAAAGAGGAAGAAGAAAAATCCATATCCTTTGACACATGA 1827 0.3968 MANSEEEEVKKALVTFMDKLAPANVQRDSMRGWNLTSNPCTDKWQGVSCNSDNQYVKSIILENFNFSGVVDAKSLCMIKSLQILSLRNNNLHGLISEDIGNCKFLTHLVLSGNKFSGDLPISIAKLSNLKRLHISDNYFSGELPNLVHVTSLISFLVENNNFTGEIPDFDFSNVEAFNVSNNNLHGPVPDVRGRFHADSFLGNPDLCGEPLSNACPPSPPPSPPPHVKKDKKSFNDDLHIYSGYIILGLIVLLFLSYKLLSKFKSKERALDAENKDVAQETSGDKASEASNSNGSKNWLNGIGIRSEYSLTSVESGMTTSGLVLLSSRKLRGMQFEDLLGAPAELIRRGKHGSLYKVMLDNGVLLAVKRIKDWGISKQEFERRMNLIAQVKHPRVMPPVAYYCSQQEKLLAYEYLQNGSLFMLLYGSQSGHSLDWGSRLNVAAKIAAALAYIHEELRESGIAHGNLKSSNILFDKNMDPCISEYGLMVAENQVHKSHKNKNLTAATFNADIYAFGVILLELLTGKVVKNDGFDLVKWVNSVVREEWTVEVFDKTIISQGASEERMMNLLQVAIKCINRSPNQRPCMSQVAEMINALKEEEEKSISFDT* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00632 608 PANTHER OS05G0588300 PROTEIN 9 598 - -
Rops10g00632 608 SUPERFAMILY L domain-like 32 193 - -
Rops10g00632 608 Gene3D Ribonuclease Inhibitor 6 172 IPR032675 -
Rops10g00632 608 SUPERFAMILY Protein kinase-like (PK-like) 344 593 IPR011009 -
Rops10g00632 608 Gene3D Ribonuclease Inhibitor 173 218 IPR032675 -
Rops10g00632 608 ProSiteProfiles Protein kinase domain profile. 340 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g00632 608 Gene3D Phosphorylase Kinase; domain 1 324 414 - -
Rops10g00632 608 FunFam Nuclear pore complex protein NUP107 6 168 - -
Rops10g00632 608 Gene3D Transferase(Phosphotransferase) domain 1 415 607 - -
Rops10g00632 608 Pfam Leucine rich repeat N-terminal domain 11 50 IPR013210 -
Rops10g00632 608 Pfam Protein kinase domain 346 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g00632 608 MobiDBLite consensus disorder prediction 271 292 - -
Rops10g00632 608 MobiDBLite consensus disorder prediction 211 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00632 Rops-Chr10 15576668 15579041 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00632 33 597 Receptor kinase-like Gene Family AT1G48480 35.632 5.23e-99 314
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Rops10g00632 Pkinase 3.9e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00632 - - pvu:PHAVU_009G180700g 907.131