Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00630 ATGCATGGGAATCGAAGTGAGAAGAGGAAAAGGGTTCGGCACATGTGGAAAGCCCCCACACGTGGTGACTCGTCTCTAAACGCCGACGTTTCATCTTCTTCATCTTGTTCTTCGTCGTCGTCAGCTAAGTCGTTCTGGAAGGACGGTCGCAAAATTAGTGTTGGTGAATGTGCTCTCTTCAAACCATCTCAAGATCGTCCACCTCTTATTGGAATAGTTCGCTATCTTACACTTGGTAAAGAGAATAAATTGAAGTTAGGCGTTAATTGGCTTTTTCGATCCATTGAAGTAAAACTTAGAAAGGGTGTTCCATTGGAGACTGCTCCAAACGAAATTTTCTACTCCTTTCATAAGGATGAGATTGATGCTGAATCGCTGCTTCATCCTTGTAAAGTTGCGTTTCTTCCTAAAGGTGCTGAACTTCCATCTGGGATTTCATCATTTGTGTGCAGGAGGGTTTATGACACTGCAAACAAGTGTTTATGGTGGTTAAATGATCAAAATTTTATTAATGATTGCCAAGAAGTACAGCAGCTATTATACAAGACTTGTGTAGAAATGCATGCAACAGTGCAGCCAGGTGGCCGATCTCCTAAGCCAATGAGTAGTCCAACATCAACATCACAGTTAAAATCTGTTTCAGATAGTGTTCAGAACAGCGCTTCTTCCTTTCCTTCTCACATTAAGGGGAGGAAAAGGGATAGGGTTGACCAAGGCTCTGAGCCTGTCAAGCGAGAACGTTCAATAAAAATTGAGGATGGAGATTCTGGTAATTTTAGGCATGATAACATTTTGAAGACAGAAATTTCCAAAATTACAGAAAAGGGAGGGCTTGTTGATACTGAAGGAGTTGAGAAATTAGTGCAGCTGATGGTTACTGATAGAAATGAGAAGAAGATAGACTTAGCTAGCCGGTCCTTGCTTGCAGCTGTTATTGCAGCAACAGAAAAATTTGATTGTCTTAGTCAGTTTGTGCAGCTGAGGGGTTTGCCTGTATTTGATGAATGGCTCCAAGAGGTCCATAAAGGGAAGATTGGTGATGGTATTGGGTCTAGGGATGGTGATAAATCTGTTGAGGATTTTCTCTTGGTATTACTTAGGGCACTTGATAAGCTTCCAGTGAATCTTCAGGCTCTACAGACATGCAACATTGGTAAATCTGTGAATCATTTGCGAACCCATAAAAATGCTGAAATTCAGAAGAAAGCAAGAGGTTTAGTTGACACATGGAAGAAACGTGTTGAAGCTGAAATGAATATAAATGATGCGAAGTCTGGTTCTGGTTCCACTGTCCCCTGGCCTGCCAAACAACGTCTTCCTGATGTTGGGCAAGGTGGGAATAGACATTCTGGTGCATCATCTGATGTTGCCATGAAGAGTTCAGTTACACAGATTTCTGCATCCAAAAATGCCTCTGTGAAGATAGTCCAGGGAGAGAATGCTGCTAGATCTGCATCAACATCTGCATTTCCAGGGCCTATGAAATCAGTGCCCTCACCTGCATCTGCAACTACAAACTTAAAAGATGGCCAGCCCCGTGTTGCTGCTGTCAGTGGCAGTTCTGATCATCCTATGGCAAATGCAAGGGATGAGAAAAGTAGTAGTTCTAGTCATTCTCACAATAACAGTCAATCTTGTTCTAGTGACCATGCTAAAACTGGTGGTCTTTCAGGAAAGGAGGATGCCAGAAGCTCTACTGCAATGAGTGCAAATAAGATATCAGGAGGCTCTTCACGGCATCGGAAATCTATTAATGGATTCTCAGGTTCAACTTCATTTGGAGGGCAAAGGGAAACTGGGTCATGTAAGAATTCCTCCTTGCACAAAAATTTAGCTTCAGAGAAAATATCTCAACCTGGATTAATGGAAAAAGCACTTGATGAAACTTCTCGTGAGGGGAATCCTCCCAAGCTTTTAGTTAAAATTCCAAATCAAGGTAGAAGTTCTACACAAAGGGCCAGTGCTGGGTCTTCTGATGATCCTACAATCATGAATAGTCGAGCCTCTTCTCCTGTCCTTTCTGAGAAGCATGATCAGTTTGATCACGGCTCGAAGGAAAAAAGTGACTTTTGTCAAGCCAATATTGGGTCAGATTTTAATACTGAATCTTGGCAGAGTAATGATTTCAAAGTTGTATTGGCTGGCTCTGATGAGGGGGATGGATTGCCTGCTGTAGTTACCGATGAAGAGCGCTGTAGGACTGGCGATGATTGTAAAAAAACATTGGAAGGATCAAAAGCTGCTTCCTCATCATCTGGAAATGAAAACAAAGCTGGGAATTTGCAGGATGCTTCTTACAGCTCCATAAATGCTTTAATTGAAGGTGTTAAGTACTCTGAAGCTGATGATGGTGGAATGAATCTTCTTGCTAGTGTGGCCGCTGGAGAGATCTTGAAGTCTGAATCGTTAACTCCAGCTGGATCTCCAGAAAGAAACGCTACTACTGTTGAACAGTCATTCACGGGCAATGGTGTAGTCAAGTCCTCTGAAGAAAATCTTGTCCAGGATGAATGCCAATCAAATAATGGTCTTGATGCTGAACAAAAGAATCAGGGTTCTATATCAAGTGAATTAGGGATGAATGATGATAATTCGGATTTTCAGGCATCTGGAGGGAAAGCTGTGAGAGAGCTAAATAATCATATTGATGCATGTAGTATGGATGTGCAACAGGTTACTGAAACTAATTTAGAAAGCAAAGGAAAATTAAATGAAAGACCTATTCCTACTTCGTTGGGCAGTCTTCCTGAAAGCAGCATGCAAGAAGCTACAGATGGTGACAGTATTAAGCAGCTCCAGGAGGAGGCTGTCAAGGGAGTGAATGTTGGTGAAATTCTTGATGTTAAGGTTAGTGGTGTTGTGGGAGTTGAGGTGGAAGCAATTGAAAAATTGTCACGTACCTCTCTGGAAGTGGATGTAAAGGGCGATAACTGTATTGCTGAAGGATCAAGTGGTGGTGGACAGACTGCTCAGAAGCCTCCTGCAATTCTTAAGCAGTCTGATTCAGCAACAGGAACAGATAAGAATGTACTCCATTATTGTGGTGTTGATAAAGTTTCTGAAGACCTCAATGAACAGGAATATGAAAAAACTGATGATATGGCTACTGAGAACCATGCTTGTAAGTCTAGAAAGCAAAGAAATGAGCGTGAAAGCGATGTCTTGACGAGGCCTGAGAGTAGAGGTTTATGTGCTAGTGTGACTGGTTTTGCTGCTGAACATGTGGAGGAGAATTCAGAAATGAAAGTGGTTCATGACCAAGATGCCGGACAGATACTTCCCAAAGCTTCATCTAGCAATTGTTCACAAGAAATTGATAAGCATCTGGATTCTAAAGGATCAAAATTGACTGCCATGGAAGCAGAAGAGGCTGAGGAGTGCACCTCTACCACTGCAGATGCTTCTTCCATGTCTGCTGCTGCTGTCTCGGATGCAGATGCAAAGGTTGAATTTGATTTAAATGAAGGGTTTAATGCAGATGATGGGAGATGTGGTGAGTTCAACAGCCTCGCCACTTCTGGATGTGCACCTGCTGTTAGATTGATCAGTCCTGTGCCATTTCCTTCTTCATCTATGTCTTGTGGTATGGCTGCCTCAATCACTGTGGCTGCTGCTGCAAAGAGGCCCTTTGTGCCACCTGAAGATTTATTGAGAAGTAAAGGGGAACTTGGTTGGAAGGGATCAGCGGCCACTAGTGCATTCCGGCCAGCCGACCCCAGGAAAGTTATGGAAATGCCTCTTGGTACACAAACTACCCCTATTCCTGATGCTGCAGCTGGAAAGCCGAGTCGACCACCATTGGATATTGACTTAAATGTGCCTGATGAAAGAATACTTGATGATGTTTCTTCTCAAAATTGTGCTCGTCACACAGATGCTGTATCTCTTGCAGCCGATGGTCATGAACCGGAATGTAGTAAGATGGCTTCACCTGTTTGGTGCTCTGGAGGGCTTGGTCTTGACTTGAACGAAGTAGATGAAGCTTCTGATGTGGGCAATTGCTCCACAAGCAGTAGTCATAAAATAGATGTACCACTTATGCAGGTGAAATCATCATTGGGTGGTCCTCCAAACAAAGAAATGAGTGTCCACAGGGACTTTGATTTGAACAATGGACCTTCAGTTGATGAAGTCACCACTGAACCATCATTGTTCTCTCAGCATGCCCGGAGCAGTGTGCCATCCCAACCACCTGTTTCTGGAATTAGGATGAGTACCGCAGAGCCAGGGAACTTCTCTTCATGGCTTCCTTCCAGCGGCAACACCTATTCTGCTGTCACAATATCGTCAATTATGCCTGATAGAGGGGATCAGCCCTTTTCAATTGTTGCCCCTAATGGGTCGCAAAGAATGTTGACTCCTGCTGCAGGTGGCAACCCATTTGGACCTGATATTTATAGGGGGCCAATATTGTCATCTTCTCCTGCAGTGTCATATCCATCTGCTCCATTTGAATATCCTGTCTTCCCTTTTCATTCCAGCTTTCCTCTTCCATCAGCATCATTTTCTGCTGGATCAACTACTTATGTATATCCAACATCAGGCAGTCGGCTTTGCTTCCCTGCAGTAAATTCACAGTTAATGGGGCCTGCCAGCTCAGTTTCATCCCATTACCCAAGGCCTTATGTTGTTGGCCTTCCAGATGGTAGCAATAGTAGTAGTGCTGAGACCAGTAGGAAATGGGCAAGGCAGGGTTTAGACCTTAATGCTGGACCTGGAGGTTCAGACATAGAGGGGAGAGATGAGAGCTCACCTCTTCAATCAAGGCAACTTTCTGTTGCCAGTTCGCATGCCCTGGCTGAGGAGCATGCGAGGATCCAGCTGGCTGGTAGTGTTTGTAAGAGGAAGGAACCTGATGGTGGGTGGGATGGCTACAAGCAATCCTCATGGCAATAG 4896 0.4381 MHGNRSEKRKRVRHMWKAPTRGDSSLNADVSSSSSCSSSSSAKSFWKDGRKISVGECALFKPSQDRPPLIGIVRYLTLGKENKLKLGVNWLFRSIEVKLRKGVPLETAPNEIFYSFHKDEIDAESLLHPCKVAFLPKGAELPSGISSFVCRRVYDTANKCLWWLNDQNFINDCQEVQQLLYKTCVEMHATVQPGGRSPKPMSSPTSTSQLKSVSDSVQNSASSFPSHIKGRKRDRVDQGSEPVKRERSIKIEDGDSGNFRHDNILKTEISKITEKGGLVDTEGVEKLVQLMVTDRNEKKIDLASRSLLAAVIAATEKFDCLSQFVQLRGLPVFDEWLQEVHKGKIGDGIGSRDGDKSVEDFLLVLLRALDKLPVNLQALQTCNIGKSVNHLRTHKNAEIQKKARGLVDTWKKRVEAEMNINDAKSGSGSTVPWPAKQRLPDVGQGGNRHSGASSDVAMKSSVTQISASKNASVKIVQGENAARSASTSAFPGPMKSVPSPASATTNLKDGQPRVAAVSGSSDHPMANARDEKSSSSSHSHNNSQSCSSDHAKTGGLSGKEDARSSTAMSANKISGGSSRHRKSINGFSGSTSFGGQRETGSCKNSSLHKNLASEKISQPGLMEKALDETSREGNPPKLLVKIPNQGRSSTQRASAGSSDDPTIMNSRASSPVLSEKHDQFDHGSKEKSDFCQANIGSDFNTESWQSNDFKVVLAGSDEGDGLPAVVTDEERCRTGDDCKKTLEGSKAASSSSGNENKAGNLQDASYSSINALIEGVKYSEADDGGMNLLASVAAGEILKSESLTPAGSPERNATTVEQSFTGNGVVKSSEENLVQDECQSNNGLDAEQKNQGSISSELGMNDDNSDFQASGGKAVRELNNHIDACSMDVQQVTETNLESKGKLNERPIPTSLGSLPESSMQEATDGDSIKQLQEEAVKGVNVGEILDVKVSGVVGVEVEAIEKLSRTSLEVDVKGDNCIAEGSSGGGQTAQKPPAILKQSDSATGTDKNVLHYCGVDKVSEDLNEQEYEKTDDMATENHACKSRKQRNERESDVLTRPESRGLCASVTGFAAEHVEENSEMKVVHDQDAGQILPKASSSNCSQEIDKHLDSKGSKLTAMEAEEAEECTSTTADASSMSAAAVSDADAKVEFDLNEGFNADDGRCGEFNSLATSGCAPAVRLISPVPFPSSSMSCGMAASITVAAAAKRPFVPPEDLLRSKGELGWKGSAATSAFRPADPRKVMEMPLGTQTTPIPDAAAGKPSRPPLDIDLNVPDERILDDVSSQNCARHTDAVSLAADGHEPECSKMASPVWCSGGLGLDLNEVDEASDVGNCSTSSSHKIDVPLMQVKSSLGGPPNKEMSVHRDFDLNNGPSVDEVTTEPSLFSQHARSSVPSQPPVSGIRMSTAEPGNFSSWLPSSGNTYSAVTISSIMPDRGDQPFSIVAPNGSQRMLTPAAGGNPFGPDIYRGPILSSSPAVSYPSAPFEYPVFPFHSSFPLPSASFSAGSTTYVYPTSGSRLCFPAVNSQLMGPASSVSSHYPRPYVVGLPDGSNSSSAETSRKWARQGLDLNAGPGGSDIEGRDESSPLQSRQLSVASSHALAEEHARIQLAGSVCKRKEPDGGWDGYKQSSWQ* 1632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00630 1631 CDD TFIIS_I 339 415 - -
Rops10g00630 1631 MobiDBLite consensus disorder prediction 840 868 - -
Rops10g00630 1631 MobiDBLite consensus disorder prediction 1028 1058 - -
Rops10g00630 1631 ProSiteProfiles TFIIS N-terminal domain profile. 340 417 IPR017923 -
Rops10g00630 1631 MobiDBLite consensus disorder prediction 674 688 - -
Rops10g00630 1631 MobiDBLite consensus disorder prediction 1609 1631 - -
Rops10g00630 1631 MobiDBLite consensus disorder prediction 744 761 - -
Rops10g00630 1631 MobiDBLite consensus disorder prediction 732 761 - -
Rops10g00630 1631 Pfam TFIIS helical bundle-like domain 365 414 IPR017923 -
Rops10g00630 1631 MobiDBLite consensus disorder prediction 897 921 - -
Rops10g00630 1631 MobiDBLite consensus disorder prediction 1 43 - -
Rops10g00630 1631 MobiDBLite consensus disorder prediction 227 255 - -
Rops10g00630 1631 MobiDBLite consensus disorder prediction 1028 1057 - -
Rops10g00630 1631 MobiDBLite consensus disorder prediction 24 43 - -
Rops10g00630 1631 SMART TFS2_5 337 416 IPR003617 GO:0005634
Rops10g00630 1631 MobiDBLite consensus disorder prediction 643 673 - -
Rops10g00630 1631 Pfam BAH domain 51 159 IPR001025 GO:0003682
Rops10g00630 1631 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 281 418 IPR035441 -
Rops10g00630 1631 MobiDBLite consensus disorder prediction 196 226 - -
Rops10g00630 1631 Gene3D - 33 271 IPR043151 -
Rops10g00630 1631 MobiDBLite consensus disorder prediction 418 460 - -
Rops10g00630 1631 MobiDBLite consensus disorder prediction 191 255 - -
Rops10g00630 1631 SMART BAH_4 50 165 IPR001025 GO:0003682
Rops10g00630 1631 MobiDBLite consensus disorder prediction 840 870 - -
Rops10g00630 1631 MobiDBLite consensus disorder prediction 537 552 - -
Rops10g00630 1631 MobiDBLite consensus disorder prediction 1565 1597 - -
Rops10g00630 1631 MobiDBLite consensus disorder prediction 482 688 - -
Rops10g00630 1631 MobiDBLite consensus disorder prediction 559 613 - -
Rops10g00630 1631 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 319 428 IPR035441 -
Rops10g00630 1631 ProSiteProfiles BAH domain profile. 50 165 IPR001025 GO:0003682
Rops10g00630 1631 MobiDBLite consensus disorder prediction 1 16 - -
Rops10g00630 1631 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 1 1631 - -
Rops10g00630 1631 MobiDBLite consensus disorder prediction 482 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00630 Rops-Chr10 15527518 15534913 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Rops10g00630 BAH 3.9e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00630 - - ccaj:109810746 2538.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g01256 5 26675611 26682502 Rops10g00630 10 15527518 15534913 ECH
Rops10g00630 10 15527518 15534913 Rops10g00630 10 15527518 15534913 ECH