Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00609 ATGTGTAACAAAGCAGGTTTTGATGCTCCTGAGGACCCTACTCCTCCTGCCCCACCTACCTCACTTGAGGAGGAAATTTCCACTGAGGAGATAATAGAGTTTCTGGAGTTACTTATAGTGATTATCCTTTCTATACTAAGCGCAGTGAAGCTTGCAGGTGGGTTGGGAATGATTTTGGCTAATACAGAAGCCAATGGTGAGGAGCTTCTTGCAGATGCACATCTTGTGCCAGCAACTATGGTACCTCTATCAGCTTATGATGTGGATAATTCTGGGAGTAAAATTAAGGATCTTGGAACTGGGAGAGAGTCAAATCCATTCATTCATGGGGCTGGACATGTTGATCCCAACAGGGCTCTTAATCCTGGGTTGGTTTATGATTTGGATAGTAATGACTATTTGGCATTTCTATGCTCAATTGGGTATGATTCTAGGCGAATATCTTGTTTCACAAGAGTGCCTACTAGTTTGAACATTTGTGAAACAATAGTATCTAGGACAGGGAGATTAACTAGTCCGGGTGATTTGAATTATCCATTTTTCTCTGTGGATTTTGGTGCCTATATTGGCGTGGTTAAGTATAAACGGGTCGTTACTAATGTGGGAAGCAATGTTGATGTTGTTTACACTGTCAAATTGAATGCTCCTGCTGGTGTTGTTGTCCTTTGTCTCCCCTAG 678 0.4204 MCNKAGFDAPEDPTPPAPPTSLEEEISTEEIIEFLELLIVIILSILSAVKLAGGLGMILANTEANGEELLADAHLVPATMVPLSAYDVDNSGSKIKDLGTGRESNPFIHGAGHVDPNRALNPGLVYDLDSNDYLAFLCSIGYDSRRISCFTRVPTSLNICETIVSRTGRLTSPGDLNYPFFSVDFGAYIGVVKYKRVVTNVGSNVDVVYTVKLNAPAGVVVLCLP* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00609 225 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 84 219 IPR045051 -
Rops10g00609 225 Gene3D Peptidase S8/S53 domain 100 133 IPR036852 GO:0004252|GO:0006508
Rops10g00609 225 Gene3D - 137 225 - -
Rops10g00609 225 CDD PA_subtilisin_like 48 85 - -
Rops10g00609 225 MobiDBLite consensus disorder prediction 1 24 - -
Rops10g00609 225 Pfam Fibronectin type-III domain 175 221 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00609 Rops-Chr10 15105706 15109068 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00609 84 225 Subtilisin-like Serine Gene Family AT3G14067 57.042 6.24e-46 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00609 - - tpra:123883043 208.764