Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00607 ATGGCTGCCGTCTGCGATGTTCTCAGGCAGAGTTTGCCGGAGGTGCATGTGCTTGCTGTTGATGACAGCCATGTGGATCGTAAGGTCATTGAAAGGTTGCTGAAAATCTCTTCTTGCAAAGTTACGGTGGTAGAGAGTGGAACCAGAGCTCTACAGTATCTGGGGTTGGATGGGGACAAGAGTTCCATTGGTGTTGATAGTGTGAAGGTTAATCTGATTATGACAGATTATTCCATGCCTGGGATGACAGGATATGAACTACTCAAGAAGATAAAGCAGGAGTCATCAGTTCTCAGAGAGATTCCAGTGGTGGTTATGTCCTCTGAGAATATCTTGACCCGAATTGATAGTTGCTTGGAGGAAGGAGCAGAGGACTTTCTATTGAAGCCTGTGAAGTTGTCAGATGTGAAACGCGTAACAGATTTCATCATGAGAGGTGAAGGGAAGAAGAGAGAAAAAAGATCTCAAAAAAGAAGCAGATCAGATGATTGTTGTCCATCTCTATCAACTGCATTCTCAATGGTTTCTCATCCATGTGATCTATCATCACTGTCACCATCTGCATTGCCCTCAAAGAAATCTAGATTGTGA 591 0.4365 MAAVCDVLRQSLPEVHVLAVDDSHVDRKVIERLLKISSCKVTVVESGTRALQYLGLDGDKSSIGVDSVKVNLIMTDYSMPGMTGYELLKKIKQESSVLREIPVVVMSSENILTRIDSCLEEGAEDFLLKPVKLSDVKRVTDFIMRGEGKKREKRSQKRSRSDDCCPSLSTAFSMVSHPCDLSSLSPSALPSKKSRL* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00607 196 SUPERFAMILY CheY-like 14 152 IPR011006 -
Rops10g00607 196 Gene3D - 15 175 - -
Rops10g00607 196 SMART REC_2 15 140 IPR001789 GO:0000160
Rops10g00607 196 ProSiteProfiles Response regulatory domain profile. 16 144 IPR001789 GO:0000160
Rops10g00607 196 Pfam Response regulator receiver domain 17 137 IPR001789 GO:0000160
Rops10g00607 196 CDD REC_typeA_ARR 17 139 - -
Rops10g00607 196 PANTHER TWO-COMPONENT RESPONSE REGULATOR 15 156 IPR045279 GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00607 Rops-Chr10 15079414 15082009 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00607 13 159 Response Regulator Gene Family AT1G74890 74.830 1.25e-72 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Rops10g00607 Response_reg 2.4e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00607 K14492 - gmx:100306152 290.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g00607 10 15079414 15082009 Rops10g00607 10 15079414 15082009 ECH