Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00605 ATGACATCCCCTAGTCATGCAATTGCAAAGGCTGTGGTGGCTACAGCTGTGGCTATGTTATTCATTGCAGGGGTTTTCTTTTACTTCTTCCAAAAGTTTGTTCTTGCTAGATACCACCAGAGGCACAATGTAGCTGCGAGTTTTCGTAGAGAACCAAGAGTGAATCATGAAGACATAAAGAAAGTTGGTGGTAATGTGAAGGGACTCATTGTTGAAGAAAATGGGGTTGATATTCTTTATATGATGGACACAGAAAGCAGGCAATTGATAACTGGATTTCCAAATGGTATATTCAATCCTAGTTATGAAGATGATGAAGAAGAAAAGAGAATAATAGATGTAATGGTCCAAAGTTCCACAATAGTGGCATGTGAATCTTCAGGTTTGATTGGTCATGAGAATCAAGTTAAACCATTATTACAACAAGTATCTGCTCTTCCATCTTCAGTTTCAGCATCACTAACACCAAGACAAAACTTGTCACATTCACCCGAGCTAGCATCTCCACTTCCACTTCCACCACTACCAAAACCTTCGCCAATGATTCTTGAGAAGAAAACTCAACCACCTCCTCCTCCTCCACCACCACCAGCTCCTCCAAGAAAAGAAATTCCAAAGGTACCACCACCTGGTCCACCTCCACTTCCAAAGGCCAGTGGCTTCATTTCATCACTGAAACCCCCACCGGTGCCTAAAGGAAAAGCAAACATAAAAAACACCAAAGAGGCTATGTTAGGGGAAAGCACAAGAGAGAAGGGTGCTGGCAAAACTAGGCTGAAGCCTCTACATTGGGATAAGGTTGTAGCTAATGTTGATCATTCAACTGTGTGGGATCAGATCAATGATGGCTCTTTCAGGTTTGATGATGAACTCATGGAAACACTCTTTGGATATTCAACCAGCAGTAAAACCAACGAAGGAAATAGAAGTCTTTCAACTTTGGCCAAGTCCAATTCTAAAACACCAACTCAAATATTCATTCTGGAGCCAAGAAAATCTCAGAACACAGCAATTGTGCTAAGATCACTAGCAGTTTCTCGCAAGGGAATCTTGGATGCACTACTTGATGGTCAGGGACTCAGTGTTGAGACACTTGAAAGACTCACCAAAATAGCACCCTCTCAAGAAGAAGCAGCCAAAATTATCCAATTTAATGGCAACCCAGATAAGCTTGCTGATGCTGAGTCTTTCCTATACTATATCCTGAAAGCAGTTCCAACAGCATTCAATCGTTTGAAAGCAATGCTTTTCAGGTCAAGTTATGATTGTGAAGTTCTTCAACTTAAGGAACACCTACAAACACTTGAAATGGGTTGTAAGGAACTGAGGACTAGTGGTCTATTTCTGAAACTCCTAGAGGCCATTCTCAAAGCTGGGAACAAGATGAATGCTGGAACTTCAAGAGGCAATGCACAAGGTTTCAACTTGAGTGCTCTTACAAAACTTTCTGATGTGAAAAGCACAGATGGGAAGACTAGTTTGCTTCACTTCATTGTGGAACAAGTAATTCAGTCAGAAGGGAAAAGACAAGCTATCTTTCAAAAGCACAACCTTCTCATAAGCAATGGTGAAACATGCAACATCAATAGACCATATTCAGATAGCCTTATACAACAAGAGACAGACAGAGAATATCTAATGCTTGGTTTACCAGTGTTAGGTGGGCTAAGTGATGAGTTATCTGAAGCAAAGAAACCAGCCAGCATAGAGTATCACAATTTCATTAGTATGTGTTCCACTCTCAGTGCTCATGTTATTGAAATTCAATCCATTATAAAATGCTGTGGCAACACTGAGAGAGGTGGATTCATCAAGGAAATGAAAGGATTCCTAGAGGAATGTGAGGAGGAGCTTAAAGTGGTGAAAGAGGAGCAAACAAGGATCATGGAGCTTGTGAAAAAAACAAATGAATACTATCTAGCAGGAGCATCCAAAGACAATATGTCAAACCCGTTTCAACTGTTTGTTATTGTAAAAGATTTTGTTGACATGGTAGATCAGGCTTGCATAGAACTGAAAAGGAAGATAGAAAAGAAGAATGTAGGAGTAGAGGCTGTATCAACACCACCTTTGTCACCAACCAAGAGGATGCCACTCAGATTCCCTAACTTTGATTTATATTTTCTGTCAAATAGGCCAGAAACTACATCTTCCAGCCAATCAGAAGATGATTTCTGA 2178 0.4045 MTSPSHAIAKAVVATAVAMLFIAGVFFYFFQKFVLARYHQRHNVAASFRREPRVNHEDIKKVGGNVKGLIVEENGVDILYMMDTESRQLITGFPNGIFNPSYEDDEEEKRIIDVMVQSSTIVACESSGLIGHENQVKPLLQQVSALPSSVSASLTPRQNLSHSPELASPLPLPPLPKPSPMILEKKTQPPPPPPPPPAPPRKEIPKVPPPGPPPLPKASGFISSLKPPPVPKGKANIKNTKEAMLGESTREKGAGKTRLKPLHWDKVVANVDHSTVWDQINDGSFRFDDELMETLFGYSTSSKTNEGNRSLSTLAKSNSKTPTQIFILEPRKSQNTAIVLRSLAVSRKGILDALLDGQGLSVETLERLTKIAPSQEEAAKIIQFNGNPDKLADAESFLYYILKAVPTAFNRLKAMLFRSSYDCEVLQLKEHLQTLEMGCKELRTSGLFLKLLEAILKAGNKMNAGTSRGNAQGFNLSALTKLSDVKSTDGKTSLLHFIVEQVIQSEGKRQAIFQKHNLLISNGETCNINRPYSDSLIQQETDREYLMLGLPVLGGLSDELSEAKKPASIEYHNFISMCSTLSAHVIEIQSIIKCCGNTERGGFIKEMKGFLEECEEELKVVKEEQTRIMELVKKTNEYYLAGASKDNMSNPFQLFVIVKDFVDMVDQACIELKRKIEKKNVGVEAVSTPPLSPTKRMPLRFPNFDLYFLSNRPETTSSSQSEDDF* 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00605 725 SUPERFAMILY Formin homology 2 domain (FH2 domain) 190 679 - -
Rops10g00605 725 ProSiteProfiles Formin homology-2 (FH2) domain profile. 249 691 IPR015425 -
Rops10g00605 725 PANTHER FORMIN-RELATED 4 689 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Rops10g00605 725 MobiDBLite consensus disorder prediction 167 217 - -
Rops10g00605 725 Coils Coil 604 631 - -
Rops10g00605 725 SMART it6_source 249 680 IPR015425 -
Rops10g00605 725 Pfam Formin Homology 2 Domain 254 665 IPR015425 -
Rops10g00605 725 MobiDBLite consensus disorder prediction 154 257 - -
Rops10g00605 725 Gene3D Formin, FH2 domain 271 684 IPR042201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00605 Rops-Chr10 15073463 15075735 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00605 223 723 FH2 protein (formin) Gene Family AT1G70140 47.515 6.89e-153 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00605 - - gsj:114409782 1039.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g00605 10 15073463 15075735 Rops10g00605 10 15073463 15075735 ECH