Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00587 ATGTCCCAAGGATCTCCCCCTCCTCCTCCTCCTCCTCATCCGCCGCCATCCACCGCCGAACCCTCTAACCCACCATCGCCGGAAAAGGAGGAACCCGCCGTTCCTCCTGCCGGAACCCGAAACCGCCCCTCCCGAGCCTGCACCATTCGCGCCGCGTCCCGACTCTATTCGCAGCCGACGATCGAGCGCCGGCCGAAGGCCTCGAAGGCGGCGAAGAAGGAGAACCGCAGAGAAAAGTCTCCGTCACCGTCGCCGCAGCCGCAGCAATGCAGTAAGATCGTGACGACGTTGGTGGAAGCGCCACCGGAGTCGCAGTTGCCACGGTGGAAATTACGGTCCATGTGGGAGTTAGCTTCTGTGCTTAATTTCTTGCATCTATTTAGGCCTCTTTTGAATGTATCAGTAGAATTCTCTGCTGAAGAGTTTGAAACTGCTCTTCTTACCCCAAATGACACGTTGAGTGATATACATATGCCTTTGCTAAAGGCAATCCCTCCCATTACACGAATGGCACTCTCACGTGATACTTGGATTACTGTATTATGCAGAAAATTAAGAGATTGGTGGCACTGGGTTGCCGATGGGGATCTTCCCATTGTTGCTTCACATGGGGCAGAGATTGAAGTATATAAATCACTTGATCCAGGAGTCCGCATCGTCATCTTAAAAGCATTATGTGACATTCGTGTTGAGCAAGAAGATATCCGAAGTTACATTGACAACTCACTCAAACATGGCGTTCAACTTTCAACATTTCGTAAGGAGCGCCTTGGTGGTGATTCGCATGGAGTTTCATTTTGGTATGAAGACGACCCAATTATTGGACATAGATTGTATCGAGAAATAAGGAAAACTGAAGTGGTTCAAGTGAAGAAAGGGAAACCCAGAGGTTCCCAGGTTCTTTCCAATACAACATACCAGTGGGAAACAGTTGCTACCAATTTTGATGAATTTCAAGATGTTTCTGAGAAGCTCTTCTCAAGTAAAAACAGAATGGAGGCTTCTGTAGGGAAAAAGATAAAGATAGACATGCTTCCTGAAATTGAGAAAGTTCACAAGAGAAAGGAGAGGTTGATGAAGAAACAACACAGACAAGCTCTTCTTCTTGATAATTTCTTGGGTGTTGACGGGCTTGCCCCAGGGCGTTCACTTCGTGATAGGAAACCTGTTACCTACACTTTTGATGATTACGATCGGTCCATCAATGAGGCTATTAAGATAACCAAACGGAAACAACCATCCCCGGAACCTATGCCCAGGAGAGAATCTGGAGCAAAACCAGAAGCTCTAACTAATGGTAAATGGAGTGGTCCTTCACATGCCCCTCAAGATCTGAATTTTAGTATGCCATCTCCAAAATCATCTGACTTTGATGATATGGAAGAAGGAAATCAAACTGACGAATTGGATCGAAGCAATCGCCGGAGACTGAGGCCTAAACGGTATTCAGAGAAAGAGTTTGTTGAAGCAGTGTCAGATAATGAAGCCGACTATGACAGTGATGATGATATTGTTGGAGAAGCCGTATATGATGAAGAATATCTCCGGAAGCGTAAGCAAAGAAGGAAGGAATCCAGTAGCTCTGCCTCTGAAGGAGATGAAGAATATCATTGGGATGAAGATAATGTTGAAGATGAAGAAGAAGACGAAGAAGATTCCTTAAGTGTCAGTGAGGATAGTGACAAGCCCCGTAAAATCAAGCAATTGCCTGGCCGTACTAGGAGGGAAACTAAACTCAGGTCTGTAGGTGAGATTCAGTCAGGTCTAAGACGCAGTAAGAGGGCAACTAGAAACCGTATAAATTACCGACAGTATGAGATGTCAGAGTCAGAAACAGAGTTCATGAAACCTGACAAGTCTAATGCATCAGATGATCACTCAGATCACAGTGAAAATGGGGAATTTATGATGGAAAGTGAAGATTCAGATGGCAATGGGGATGAAAATCAAGAAATGAAAGTAGTGGAGGAGCCTGTTTCATACCCTTCAGCAGGCGGGAACAAATACCCTGCTGTAGTAGAAGAGAATGAACAAAACCAGAACCAGCCTCCAGAAAAATCAAGTAATCCGGGTCAGGAGGAAGTTGAGGGCATGCAAAAGAGACGTTTCCTTGATTTGAATGAGCTTGCTCCTAGCTCAGGTTTTGATGATGTTCCAAATACAACAACAAAAGATGAAGGAAATGATGATTAA 2193 0.4528 MSQGSPPPPPPPHPPPSTAEPSNPPSPEKEEPAVPPAGTRNRPSRACTIRAASRLYSQPTIERRPKASKAAKKENRREKSPSPSPQPQQCSKIVTTLVEAPPESQLPRWKLRSMWELASVLNFLHLFRPLLNVSVEFSAEEFETALLTPNDTLSDIHMPLLKAIPPITRMALSRDTWITVLCRKLRDWWHWVADGDLPIVASHGAEIEVYKSLDPGVRIVILKALCDIRVEQEDIRSYIDNSLKHGVQLSTFRKERLGGDSHGVSFWYEDDPIIGHRLYREIRKTEVVQVKKGKPRGSQVLSNTTYQWETVATNFDEFQDVSEKLFSSKNRMEASVGKKIKIDMLPEIEKVHKRKERLMKKQHRQALLLDNFLGVDGLAPGRSLRDRKPVTYTFDDYDRSINEAIKITKRKQPSPEPMPRRESGAKPEALTNGKWSGPSHAPQDLNFSMPSPKSSDFDDMEEGNQTDELDRSNRRRLRPKRYSEKEFVEAVSDNEADYDSDDDIVGEAVYDEEYLRKRKQRRKESSSSASEGDEEYHWDEDNVEDEEEDEEDSLSVSEDSDKPRKIKQLPGRTRRETKLRSVGEIQSGLRRSKRATRNRINYRQYEMSESETEFMKPDKSNASDDHSDHSENGEFMMESEDSDGNGDENQEMKVVEEPVSYPSAGGNKYPAVVEENEQNQNQPPEKSSNPGQEEVEGMQKRRFLDLNELAPSSGFDDVPNTTTKDEGNDD* 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00587 730 MobiDBLite consensus disorder prediction 436 453 - -
Rops10g00587 730 MobiDBLite consensus disorder prediction 512 730 - -
Rops10g00587 730 MobiDBLite consensus disorder prediction 557 581 - -
Rops10g00587 730 MobiDBLite consensus disorder prediction 673 694 - -
Rops10g00587 730 Pfam DDT domain 119 164 IPR018501 -
Rops10g00587 730 MobiDBLite consensus disorder prediction 1 32 - -
Rops10g00587 730 MobiDBLite consensus disorder prediction 512 533 - -
Rops10g00587 730 MobiDBLite consensus disorder prediction 404 423 - -
Rops10g00587 730 MobiDBLite consensus disorder prediction 404 477 - -
Rops10g00587 730 PANTHER REMODELING AND SPACING FACTOR 1 63 720 IPR028938 GO:0006355|GO:0031213
Rops10g00587 730 MobiDBLite consensus disorder prediction 65 80 - -
Rops10g00587 730 MobiDBLite consensus disorder prediction 1 90 - -
Rops10g00587 730 MobiDBLite consensus disorder prediction 604 636 - -
Rops10g00587 730 MobiDBLite consensus disorder prediction 534 556 - -
Rops10g00587 730 MobiDBLite consensus disorder prediction 455 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00587 Rops-Chr10 14845173 14855661 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Rops10g00587 DDT 1.3e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00587 - - gmx:100816258 1112.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g03942 2 72203958 72212402 Rops10g00587 10 14845173 14855661 PCT