Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00583 ATGGAGTGTATGAACAACTTGAATAATTTCTACCTTGATTCGAAGTGGGTATCAACGGTGGCGAGTATATGGATTCAGTGCACCAGTGGGTCACTTTACACTTTCTCTATTTACTCCCAGACTATCAAGTCAACGCAACACTACGATCAGTCAACGCTCGACATCGTCTCTGTTTTCAAGGACATCGGAGCCAACGTTGGTGTCGACTCGGGCCTCCTATACGATTTCGTTGCCTGTGGAACAATTACTGGGCCTTGGTTGGTCCACTTCTTGGGCTCGGCCCAATGCTTCTTGGGCTATTTCCTCATGTGGGCCACCGTCGCCGGCCTCCTTCCACCGGTGCCGGTGCCGGTGATGTGCCTGTTCATGTTCGTGGCAGCTCATGCTCAGACCTACTTTAACACTTCCAATGTTGTCACTGGCGTTCGTAATTTCCCTAGCTACAGTGGAACCATTGTCGGCATTATGAAGGGATTTCTTGGTCTTAGTGGAGCAATATTAATTCAAGTGTATAGAACAATATTCAACAACAAGCCCATGTCTTATCTTCTGATGCTAGCACTCTTACCACCTACAAATACTTTGTTGTTTATGTGGTTTGTAAGAATCCACAACACTCGTGAGGGAGAAGAAAGGAAGTATCTAAATATATTTTCTTTTATGGCTCTGGTTGTTGCTGCATATCTTATGGTTGTTATAATCCTAGAGAACAACCTTAGTCTGCAATTATTGGTCCGCATCTTCATATTCTTTGTGCTTATGGTGTTGCTAGCATCACTTCTTTGCATTGCATTTAAAGCACATGAAAGGAGCTCAAATAGTGCTTCAGAAAGTTTTCTTGACGAGGGGTCTCAACTAATGGATGCAAGGCAAGATTCTTGTAACAACCCTTTGCCTGAAACTAACAATCAAAGGGCTTTGCAATTAGGAGAAAATCTGAATCTTTTGCAAGCAGTGAAAACTATAAACTTTTGGATTTTGTTTGTTTCTATGGCATGTGGTATGGGATCAGGACTTGCAACAGTTAATAATATGGGTCAAATAGGTGAATCCCTTGGTTATACCAGTCATGAGACAAGTTCCTTGGTTGCTTTATGGAGCATTTGGAATTTTCTTGGCCGTTTTGGAGCTGGTTATGTTTCAGATTATTTTTTGCACACAAGGGGATGGGCAAGACCTTTATTTATGGTCATCACTTTGATGATCATGAGCATTGGCCTTGTGGTGATTGCTTCTGGAATGCCAAGTGCTCTATATGTTGGTTCAATATTGGTGGGTATTTGTTATGGCTCTCAGTGGTCCCTAATGCCCACAATCACTTCTGAGATATTTGGAGTGAGACATATGGGTAGCATATTCAACACCATTACTATAGCAAGTCCAGTGGGATCTTATATATTTTCTGTAAGAGTAGTTGGGTATATATATGATAAAGAAGCATCAGAAGGAGACACTTGCATTGGAACTCATTGTTTTATGTTTCCTTTTCTCATAATGGCATGTGCCACTATTTTGGGTTCTCTGACAGCTTTAGGTTTGTTTTTTAGGACCAAAAACTTTTATGGTCAGGTTGTACTAAGAAGAATTCAAAATATTATGTGA 1602 0.412 MECMNNLNNFYLDSKWVSTVASIWIQCTSGSLYTFSIYSQTIKSTQHYDQSTLDIVSVFKDIGANVGVDSGLLYDFVACGTITGPWLVHFLGSAQCFLGYFLMWATVAGLLPPVPVPVMCLFMFVAAHAQTYFNTSNVVTGVRNFPSYSGTIVGIMKGFLGLSGAILIQVYRTIFNNKPMSYLLMLALLPPTNTLLFMWFVRIHNTREGEERKYLNIFSFMALVVAAYLMVVIILENNLSLQLLVRIFIFFVLMVLLASLLCIAFKAHERSSNSASESFLDEGSQLMDARQDSCNNPLPETNNQRALQLGENLNLLQAVKTINFWILFVSMACGMGSGLATVNNMGQIGESLGYTSHETSSLVALWSIWNFLGRFGAGYVSDYFLHTRGWARPLFMVITLMIMSIGLVVIASGMPSALYVGSILVGICYGSQWSLMPTITSEIFGVRHMGSIFNTITIASPVGSYIFSVRVVGYIYDKEASEGDTCIGTHCFMFPFLIMACATILGSLTALGLFFRTKNFYGQVVLRRIQNIM* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00583 533 ProSiteProfiles Major facilitator superfamily (MFS) profile. 322 533 IPR020846 GO:0022857
Rops10g00583 533 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 16 522 - -
Rops10g00583 533 SUPERFAMILY MFS general substrate transporter 216 519 IPR036259 -
Rops10g00583 533 CDD MFS_Mch1p_like 14 506 - -
Rops10g00583 533 Pfam Major Facilitator Superfamily 327 517 IPR011701 GO:0022857|GO:0055085
Rops10g00583 533 Gene3D MFS general substrate transporter like domains 213 511 IPR036259 -
Rops10g00583 533 Pfam Nodulin-like 15 264 IPR010658 -
Rops10g00583 533 SUPERFAMILY MFS general substrate transporter 19 205 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00583 Rops-Chr10 14790144 14793325 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00583 12 531 Nodulin-like Gene Family AT1G74780 55.827 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00583 - - lja:Lj1g3v0437880.2 887.486