Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00582 ATGGAGTGGCTCGCGAATCGCTGGGTCGGAGTTGCAGCAGCGATATGGATCCAGTGGAGCTGCGGTGCATCATACACCTTCAGCATCTATTCCCCTGTTCTCAAATCCACACAAGGATATGACCAATCTACCCTTGACACCGTTTCTGTTTTCAAGGATATTGGCGCCAATTTCGGCGTCCTTTCCGGCCTCCTCTACTCCGCCGTCACACCATACTCCGACCACCGTGGTCGTCCCGTTCCGTCGAAGTCCAAATGGGCCTCACTCGCCGGACCTTGGGTGGTTGTCGCCGCCGGAGCAATTCAGTGTTTCGTCGGATTTATTTTCATTTGGGCTTCTGTTGTCGGGTTGATTGACCCGCCACCCGTACCCGTTATGTGTTTTTTCGCTTGGCTTGCGTCTAATGGTCAAACCTTCTTGAACACCACTAATGTTGTTACTGGTTTGCGTAATTTTCCTGAATATAGTGGCACCATCATTGGCATCATGAAGGGCTTTGTTGGGCTTAGTGGAGCTATCCTGATCCAATTGTATCACACATTTTGTGATGGAGACCCGATAACTTACCTTCTGATGCTTGCTTGCTTGCCTGCATTAATCTGCGTGTTGCTTATGTTTTTGTTGAGGATCTATGAAGTGCACGGCGGTGATTACAAGAAGCATTTGGATGGTTTCTCTGTGGTAACGGTGATTATTGTTGCATATCTCATGTTCATAATAATTTTGCAAAATTTCATGAGACTACCGTATTGGGGACAATTGTTTGCTTTTGTGATCCTTATGGTTCTATTAGCATCGCCTTTTGGCATTGCTGTCAAAGCCCAATGGGAGGAGTCACGGAAACTTGCACCTTCAATGGAATACCAAGAGCTGCCTAGTGAGGTAGAGGTGAATTCGGATGATGTGGTGCCACGTGAAGAAGAAAAGAACCTTTTGCAAGCTATGTGTACGGTTGAATTTTGGATGTTGTTTGTGACCATGATATCAGGGTTAGGCTCTGGGTTGGCAACTATAAATAATATGAGCCAAATAGGACAATCTCTTGGATATAGTACTATTGAGATTAGTAATATGGTATCATTGTGGAGTATGTGGAATTTCCTTGGCCGTTTTGGAGGGGGCCATGTGTCAGATTATATCATGCATAGAAAAGGTTGGCCGAGGCCCCTGTTGATGGTCTTAACTCTGGGGATAATGATTCTTGGTCATGTCATTATAGCTTCTGGTTTCCCTGGAAATTTGTATTTGGGCCCTGTTCTGGTGGGTGTCTGCTATGGTGCACATTGGTCCTTAATGCCTACAATCACTTCTGAGATATTTGGTGTGAAGCATATGGGCACCATTTTCAACACTATTGCTGCGGCAAGTCCACTTGGGTCTTATATACTTTCTGTGAGAGTTGTTGGATATATTTATGACAAGGAAGCCAGTGAAGAAGATAACTCATGCTTTGGTATCCACTGTTTCATGTTGTCGTTTCTCATCCTGGCTGGTGTGGCTTTTCTTGCATTTTTGGCTGGTCTGGCCTTATACTTCCGAACTCAAAAGTTCTATAAGCGAGTTGTGATTAGAAGATTAAAACATTATGTACAATGA 1596 0.4467 MEWLANRWVGVAAAIWIQWSCGASYTFSIYSPVLKSTQGYDQSTLDTVSVFKDIGANFGVLSGLLYSAVTPYSDHRGRPVPSKSKWASLAGPWVVVAAGAIQCFVGFIFIWASVVGLIDPPPVPVMCFFAWLASNGQTFLNTTNVVTGLRNFPEYSGTIIGIMKGFVGLSGAILIQLYHTFCDGDPITYLLMLACLPALICVLLMFLLRIYEVHGGDYKKHLDGFSVVTVIIVAYLMFIIILQNFMRLPYWGQLFAFVILMVLLASPFGIAVKAQWEESRKLAPSMEYQELPSEVEVNSDDVVPREEEKNLLQAMCTVEFWMLFVTMISGLGSGLATINNMSQIGQSLGYSTIEISNMVSLWSMWNFLGRFGGGHVSDYIMHRKGWPRPLLMVLTLGIMILGHVIIASGFPGNLYLGPVLVGVCYGAHWSLMPTITSEIFGVKHMGTIFNTIAAASPLGSYILSVRVVGYIYDKEASEEDNSCFGIHCFMLSFLILAGVAFLAFLAGLALYFRTQKFYKRVVIRRLKHYVQ* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00582 531 ProSiteProfiles Major facilitator superfamily (MFS) profile. 318 531 IPR020846 GO:0022857
Rops10g00582 531 Gene3D MFS general substrate transporter like domains 312 518 IPR036259 -
Rops10g00582 531 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 519 - -
Rops10g00582 531 Pfam Major Facilitator Superfamily 323 519 IPR011701 GO:0022857|GO:0055085
Rops10g00582 531 Pfam Nodulin-like 7 69 IPR010658 -
Rops10g00582 531 Pfam Nodulin-like 90 271 IPR010658 -
Rops10g00582 531 SUPERFAMILY MFS general substrate transporter 3 210 IPR036259 -
Rops10g00582 531 CDD MFS_Mch1p_like 7 503 - -
Rops10g00582 531 SUPERFAMILY MFS general substrate transporter 232 516 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00582 Rops-Chr10 14783958 14787332 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00582 1 528 Nodulin-like Gene Family AT1G74780 57.621 0.0 617
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00582 - - gmx:100775628 914.835