Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00526 ATGGAGAATCATCAACTCACTGGTTGGATGTCTAATTATGAAACAGATGATTATCCATTTGCACGTACATGTCAATTATCTTCATATGATCTTTGCAGGGGTTATCCTAGTGAAGGGTATGTTTCATTGGATTGGCCATATGGATTTTCCATGCAAGATAGCAATTTTGATGCTACCCCTTTTATGGAATATTATTATCCTGAAGTTCCATGTGAAACTCTGCCCAATGAACCAACACCAATAAGTGGACTAGACTATGACTTTTGTGATGTTAAAAATGTGCTTTCTGTGTGGAAAGAAGTTGATGCTGGGTTTGATTTGGATAAACCTATGTTTTCAATTTGCAACAATGGAGAAAGTGTTTGCAGCAATGGAGAAAGTGTGAAGGAAATGAGGGGAGATTTGAAAGGTAAGAGATGCAGAGAAGAGGAAAGTAGCAATAATACCAGAATGTTATCAAGGAAGACCATTTCTCAGTACTTCTACATGCCAATATCACAAGCAGCCAGAGAGCTTAATGTGGGTTTGACACATTTGAAGAAAAGGTGTAGGGAGTTAGGAATTCAAAGGTGGCCACACAGGAAGCTAATGAGCCTTCAAACCCTCATAAAAAATGTACAAGGGCAAGGAGAGGGGAATGGAAGTGATGAAAAGATAAGGCAAGCCATTGAGATATTGGAGAAAGAAAAGAAGATGGTGGAGGAAATGCCGGATTTGCAACTTGAAGACAATACAAAAAGGCTTAGACAAGCTTGTTTTAAGGCCAATTACAAGAAGAGGAAGCTCATGGTCATGGGGTTGATGGAACCACAATCTTCTTCTTTTAGTGGCCATGCTTGA 840 0.3929 MENHQLTGWMSNYETDDYPFARTCQLSSYDLCRGYPSEGYVSLDWPYGFSMQDSNFDATPFMEYYYPEVPCETLPNEPTPISGLDYDFCDVKNVLSVWKEVDAGFDLDKPMFSICNNGESVCSNGESVKEMRGDLKGKRCREEESSNNTRMLSRKTISQYFYMPISQAARELNVGLTHLKKRCRELGIQRWPHRKLMSLQTLIKNVQGQGEGNGSDEKIRQAIEILEKEKKMVEEMPDLQLEDNTKRLRQACFKANYKKRKLMVMGLMEPQSSSFSGHA* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00526 279 PANTHER PROTEIN RKD4 130 273 IPR044607 GO:0003700
Rops10g00526 279 Pfam RWP-RK domain 152 199 IPR003035 -
Rops10g00526 279 Coils Coil 216 236 - -
Rops10g00526 279 ProSiteProfiles RWP-RK domain profile. 132 219 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00526 Rops-Chr10 13704295 13705694 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00526 138 261 AtRKD Transcription Factor Family AT1G18790 64.844 1.18e-52 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Rops10g00526 RWP-RK 3.5e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00526 - - gmx:100782238 351.673