Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00524 ATGAAGTTAGAAGTGGAGGTAATCTCCAAAGAAATCATCAAACCCTCTTCTCCAACCCCTAACCATCTTTGTCATTATCAACTATCTTTCCTCGACCAAGTGGCTTCGATGGTGTACAATCCCATAGTTCTCTTCTACTCTAACGATGGTACCACTCAATTCAACATAACCACCATATTCAACCAGCTCAAGAAATCTTTGTCGGATATCGTAACCCATTTCTACCCACTACCTGGGAGAATGAATGACAATAGTTTCATAGATTGCAACGACAAAGGCATCCCCTACTTAGAAGCAAAAGTGAAGTGCAAACTTGTGGAGGTTATCAATGTGCCAATCCTAGGAGAACTCAACCATTTGGTTCCATTTCAACTAGATGATGTCACTGATATCTTATTCGGTGTTCAACTTAATGTATTTGATTGCGGTGGTATTGGAATTGGTGCTTGCCTTTCTCACCAAATTGCAGATGGTTCATCACTTTTCACATTCCTCAATAGCTGGACAACCATTGCTAGTGGACGACAAGCTGTGTTGCCAAAACCACAGTTTCTTCCCACCCAAGAACATTTCTGGGTTTGA 582 0.4124 MKLEVEVISKEIIKPSSPTPNHLCHYQLSFLDQVASMVYNPIVLFYSNDGTTQFNITTIFNQLKKSLSDIVTHFYPLPGRMNDNSFIDCNDKGIPYLEAKVKCKLVEVINVPILGELNHLVPFQLDDVTDILFGVQLNVFDCGGIGIGACLSHQIADGSSLFTFLNSWTTIASGRQAVLPKPQFLPTQEHFWV* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00524 193 Gene3D - 1 191 IPR023213 -
Rops10g00524 193 PANTHER F21J9.9 6 187 - -
Rops10g00524 193 Pfam Transferase family 4 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00524 Rops-Chr10 13683981 13684562 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00524 3 180 Monolignol Biosynthesis Gene Families AT5G48930 26.344 1.09e-16 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00524 K13065 - gmx:102670206 277.33