Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00523 ATGCTGAACGTTGAAGAGAAGTGTTATGGTCTAGTGACGCAGTTTAGGGATCAGATAAAGAAGGTTGACAAGGATTATGTGAGAAAAGTTAGAGAGGGAAACGAGCATTTGGATTTTATGAAGGATTTTTTCTATAGAGTTTATGTGAAGGAGGAGTTAGTCTCGTTTGAATTCACTAGTTTGTGTAGGTTTCCTTTGTATCATGCTGATTTTGGTTGGGGAAAACCGACATGGGTAGGTGCACCTGCATTAACCTTTAAGAATCTAGCTGTGTTTGTTGACAGCAAGATTGGTGGTGGCATAGAGGTGTATGTTAGCTTGAAGGTGGAGGACATGAAAAAGTTTGAAGCAGACCAAGAGTTGCTTGCCTGTGTGAATAAAGCATAA 387 0.4005 MLNVEEKCYGLVTQFRDQIKKVDKDYVRKVREGNEHLDFMKDFFYRVYVKEELVSFEFTSLCRFPLYHADFGWGKPTWVGAPALTFKNLAVFVDSKIGGGIEVYVSLKVEDMKKFEADQELLACVNKA* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00523 128 PANTHER F21J9.9 10 124 - -
Rops10g00523 128 Pfam Transferase family 12 121 - -
Rops10g00523 128 Gene3D - 2 125 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00523 Rops-Chr10 13655331 13656378 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00523 14 116 Monolignol Biosynthesis Gene Families AT5G48930 29.245 7.66e-10 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00523 K13065 - gmx:102670206 190.66