Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00520 ATGGGCACCTTTCTCGTGGTTATGCAAGCAACATGGGTGGCTACAAATATGAGGGCTTTGTTGAGGTTCTTGCAGCCTAGCAGAGTCCTGAGGAACCTAATTGGTTCCAGTGAAGTTTATATTAGAGCATCTGCAAAAGAAAGGCCATTTACAATTAAGGAGGTGAAGGCTTCGAACATTGGTCAGTTTGTGAGGATATATGGTATAGTCACGCGTTGCTCGGATGTTAAACCATTAATGCAGGTGGCTGTATACACTTGTGAGGATTGTGGTTTTGAAATTTATCTGGAAGTAACAGGTCGAGTCTTGATGCCTTTGTTTGAATGTCCATCAAAGCGCTGTCAGACAAATAGAAGTAAGGGGAATGACATCCTTCAACTGAGAGCATCAAAGTTTTTGAGATTTCAAGAGGTGGCTCCAAGTGATGTGGTTAAATTATTTGGGATTTTACTTCCTATACCTTACATTAGTTTTAGAGCAATGCGCCCCAGCCTAGTTGCTGACACTTATTTAGAGGCCATGTCTGTAACTCATTTCAAGAGAAAATATGAAGAATTTGAACTTAGAGGAGATGAGGAAGAACAAATTGCTCGTTTAGCAGAAGATGGTGACATCTACATTAAGTAG 627 0.4067 MGTFLVVMQATWVATNMRALLRFLQPSRVLRNLIGSSEVYIRASAKERPFTIKEVKASNIGQFVRIYGIVTRCSDVKPLMQVAVYTCEDCGFEIYLEVTGRVLMPLFECPSKRCQTNRSKGNDILQLRASKFLRFQEVAPSDVVKLFGILLPIPYISFRAMRPSLVADTYLEAMSVTHFKRKYEEFELRGDEEEQIARLAEDGDIYIK* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00520 208 Gene3D - 50 180 IPR012340 -
Rops10g00520 208 Pfam MCM OB domain 52 138 IPR033762 -
Rops10g00520 208 PRINTS Mini-chromosome maintenance (MCM) protein 7 signature 67 78 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Rops10g00520 208 PRINTS Mini-chromosome maintenance (MCM) protein 7 signature 102 114 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Rops10g00520 208 PRINTS Mini-chromosome maintenance (MCM) protein 7 signature 85 96 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Rops10g00520 208 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 39 138 IPR031327 GO:0003677|GO:0005524|GO:0032508
Rops10g00520 208 SUPERFAMILY Nucleic acid-binding proteins 38 173 IPR012340 -
Rops10g00520 208 SMART mcm 48 208 IPR031327 GO:0003677|GO:0005524|GO:0032508
Rops10g00520 208 FunFam DNA replication licensing factor MCM7 79 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00520 Rops-Chr10 13575870 13577808 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00520 38 208 Core DNA Replication Machinery Family AT4G02060 63.682 3.54e-82 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00520 K02210 - vvi:100267599 277.33