Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00517 ATGGCTACCGCCGGTGATGTTTTCCGGCCGAATTTAATGAAAGTGCTCAAGGAGTCACCTTATGGTGTTGGAGAACTACATGTTCTTGTTGTTGATGACAGCCTTGTCGATCGCAAATTCATTGAACGCTTGCCGAAGATTTCTTCTTGTAAAGAAGTTAACAAGATCTTTTCTTTTGGATTAATCATGGCATGTTCCTTGAAGAGTGTTTTCTGTGTTCCTGGGTTGAATGAGAGTATGCATGTCTCTAAAACCAAAGGGGTATTGAGTCTTTGTACCTCAAGACCTGGCAAAGCAAGATCAAGAACCTGTTCAATTTTGAGCACTGATTTCATGGGAAAAACCATTGATCTTTCAGTTCAAAAAGGCTCAGGGTATTGCAGTTCAAAAACCTCTAGCAATTTCTCTGTTAACGCACAAGCAACAATTTGCATTAGCAAGGCTTTGAAGTGGTGGAAGAAGAATCTGAAGCCTAATATGATTGAGATCCATTCAGCACAAGAACTGGTCCATTCTTTACTCAATGCTGGTGATTCATTGGTTGTGGTGGATTTCTATTCACCTGGCTGTGGAGGCTGCAAAGCCCTTCACCCAAAGATCTGTCAAATAGCAGAACAGTACCCAAATGCAATCTTTCTTAAAGTAAATTATGAGGAGCTGAAAACCATGTGTCATGGTTTGCACATTCATGTGTTACCATTTTTCAGATTCTATAGAGGTGCAGAGGGAAGAGTTTGTAGCTTCAGCTGTACCAATGCAACTATCAAAAAATTTAAGGATGCCTTGGCAAAACATGGGAATGAACGTTGTAGTTTAGGCCCAGCAAAAGGCTTGGATGAATCAGAGTTGAAAGTTTTGGCATCCATTGGTGAAATATCAGTTAGTTCTCCATTACTATATCCCATGGAAGGGAAATTGAAGGATTTGGTTCTAGAAAGCAATGATTTTTCTGGTGTATGGAGCATGGCAAGTAATAATAACAGGGGACATATGCAGGATGCTATATATTGA 1011 0.4006 MATAGDVFRPNLMKVLKESPYGVGELHVLVVDDSLVDRKFIERLPKISSCKEVNKIFSFGLIMACSLKSVFCVPGLNESMHVSKTKGVLSLCTSRPGKARSRTCSILSTDFMGKTIDLSVQKGSGYCSSKTSSNFSVNAQATICISKALKWWKKNLKPNMIEIHSAQELVHSLLNAGDSLVVVDFYSPGCGGCKALHPKICQIAEQYPNAIFLKVNYEELKTMCHGLHIHVLPFFRFYRGAEGRVCSFSCTNATIKKFKDALAKHGNERCSLGPAKGLDESELKVLASIGEISVSSPLLYPMEGKLKDLVLESNDFSGVWSMASNNNRGHMQDAIY* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00517 336 Gene3D Glutaredoxin 151 267 - -
Rops10g00517 336 Pfam Thioredoxin 172 244 IPR013766 -
Rops10g00517 336 SUPERFAMILY Thioredoxin-like 150 266 IPR036249 -
Rops10g00517 336 PANTHER THIOREDOXIN, MITOCHONDRIAL 127 285 - -
Rops10g00517 336 ProSiteProfiles Thioredoxin domain profile. 126 291 IPR013766 -
Rops10g00517 336 FunFam Thioredoxin-like 1-2, chloroplastic 149 267 - -
Rops10g00517 336 CDD TRX_family 176 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00517 Rops-Chr10 13520670 13527571 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00517 5 51 Response Regulator Gene Family AT3G48100 48.980 7.43e-08 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00517 - - gmx:100801871 438.728