Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00509 ATGGGGAAAGAAATCGTGGCGGTGAAATCGGTGACCTATGCACTCTCTCCTTTCCAGCAGAAGATCATGTCTGGTCTCTGGAAGGATATACCCTCCAAGATTCACCACAAGGTCTCCGAGAATTGGATCAGCGCCACTCTCTTGCTCGGTCCTCTCACCGGAACCTACATGTATGTTCAGAACTACCTGGAGAAGGAGAAGTTGGCTCACAGAAATTCTGTTGCTACTTCACTCACTACTTACAATGATTGCCAAAAAGATAAAGCCACTAAAGCAGTGAATCTATTCACGAAAGATTTCAAATTCCAAAACATCCCTCTTTACACTGCAATCATGGCAAGGGTTCCGCCGGCAAATCCTTCTCCTTCAGCTTCAATGGCTTCCACACTCAGAGCCTACGCGCTCCCTCTTATTCTCTTCGCTGCAGCCATGTTTTACCAACTATTTGTTATTCCCAATGCCTTCCCTCCTTCTCATTACGACGTTCTGCAAATTGAGAGGTATAGTTCGATTGACAAGGTGAAGGAGGCTTACGAAAAACTTGAATCTAAATGGAATTTGGCTGGGGAAGTTTCTGATATTCATGAGTTTTTAAAGATTCGATATGCCTATGAGTTGCTGACAAATCCTTTATGGAAAAGAGACTATGACATATTTGGCATTGATGAACAACTTCATATTGTTGAGAGTGCTAGCAAGCGTCATGCACGGAAAAGTATTTCACAATTGGACTTCCCTTTACTGCATGCCCCTTCTTCTGCTTTTATTGATCATTCTTCTGAAGTCATCACTGCAAGTGACTTCCGGTCTATATTTCCAGATGCAAAGCCATGGCTAATTCAGTTGTATTCATTGGGGAGCCATCGTTGTGCGGAGTTTTCTAAGTCCTGGAATAAAATTGCTTCTTTATTGGATGCTGTTGCAAATATTGGTATGGTGGAACTTGGTGAGAAGGAGCTTTCCATATACCTTGCTGATAAAAGATCAACAGGAAAACCTTTTTTCAGAAATGGAATTCCATCTCTTGTTGCCATTCCTCCTAGATGTCGTGCTGCAAAATGCTTTAGCAGGTTTGATGGTGAGCTTACCGTTGACAAGGTTACAAATTGGTTTGCAACAACTGTATTGACTTTACCTCAAGTTAACTACTACTCAAAGGAGTCGCTGGTGCCAAATTTTCTTTTGAAAACAAGTCATCACAAGGTAAAAGTCATCTTTTTCTCAAATACTGGGGAGCGTGCTGCTCCATTTATACGACAAGCAGCCAAAGACTATTGGGCTTATGCTTCATTTGCTTTCATTCTCTGGCGGGAAGAGGAATCTTCCTATTGGTGGGGAGCATTTGAGGTGGAATCTGCACCTGCTATAGTATTTCTTAAAGACCCAGGTGTCAAACCTGTTGTGCACCATGGTTCAGTTAACAATTCATTTTTCTTGAATATGATGGAAAATAATAAACAGCCAGAGCTTCCACAACTAAGAAGTGTGACATTAATGGAGCTAGGCTGTGATCCCCGTGGCTACTCTCGTGCTGGATATGATACAATTATTTGGTATTGTGCTATTGTAGTAGGAAGGCCAAGCCTGGAATTGAACAAAATGCGTGAAACTATGTGCAGGGTCCAAGAAACATTGTCTAAAAATAGTGAGGTAGGTGCCTCATCTGAAAATCAATCCTTAGCTCCAGCCGTGGATGCATTTAAGAGAAAGCGGTTGACATTTGCTTGGCTTGATGGTGAAAAGCAAAAGGACTATTGTCAATTTTACATTGGTGCGGCCAGCGCTCATTCTTGTGGACAACGGAGGGATATGACTGATATTCCTCATTTATTTGTCATTCGTTACCTAAGGAATAGTAGTGCTGCTGATAAGAGGACACAGGAAATGACAAAGTGGAAATCGTTACTGGTCCAAGATCTAATGGATGAGTCTGATCAGGCAGGCCAGTTTGTAGCTGGGTACAAGGGTGAAGTTGATGTTTCACAGATAACACAATGGCTTGCAAATATAACAAAAGATGGCGACTCCCGAGATTTACCATTCTTCACACTAAGAACTCCTAAGCTTGTTCCAGATGACACAGAACCTATTTGGTCCAAAACTTCACAAAACATTCCTTTGAGAAATCTGAAGCAGAATATTCTGGGTGTTGTAAGTGGACTCTCTATTTACCTTGAAGATCCAAGAATTGGTCCTTCTTTGCTTCTGGGAGCATTAATTTCTCTGGGTACCATCTGGTTGAGAAGGAGCCAACAAGTTCAGCCATCTCAATCAAATCAACCAAGTCAACCTAGTTCCGAGGCACCTCCCCAGGATAAAAGAAAACAGAGACCAACAGACCGGGTTCGGAGTCGGTCAAACAAAAATGCACCCCCTTCTATGACAGATGTGGAACCATCTGATGCTTACCAGATGCCACTATCAGATTCTGACTCAGATTAG 2442 0.4234 MGKEIVAVKSVTYALSPFQQKIMSGLWKDIPSKIHHKVSENWISATLLLGPLTGTYMYVQNYLEKEKLAHRNSVATSLTTYNDCQKDKATKAVNLFTKDFKFQNIPLYTAIMARVPPANPSPSASMASTLRAYALPLILFAAAMFYQLFVIPNAFPPSHYDVLQIERYSSIDKVKEAYEKLESKWNLAGEVSDIHEFLKIRYAYELLTNPLWKRDYDIFGIDEQLHIVESASKRHARKSISQLDFPLLHAPSSAFIDHSSEVITASDFRSIFPDAKPWLIQLYSLGSHRCAEFSKSWNKIASLLDAVANIGMVELGEKELSIYLADKRSTGKPFFRNGIPSLVAIPPRCRAAKCFSRFDGELTVDKVTNWFATTVLTLPQVNYYSKESLVPNFLLKTSHHKVKVIFFSNTGERAAPFIRQAAKDYWAYASFAFILWREEESSYWWGAFEVESAPAIVFLKDPGVKPVVHHGSVNNSFFLNMMENNKQPELPQLRSVTLMELGCDPRGYSRAGYDTIIWYCAIVVGRPSLELNKMRETMCRVQETLSKNSEVGASSENQSLAPAVDAFKRKRLTFAWLDGEKQKDYCQFYIGAASAHSCGQRRDMTDIPHLFVIRYLRNSSAADKRTQEMTKWKSLLVQDLMDESDQAGQFVAGYKGEVDVSQITQWLANITKDGDSRDLPFFTLRTPKLVPDDTEPIWSKTSQNIPLRNLKQNILGVVSGLSIYLEDPRIGPSLLLGALISLGTIWLRRSQQVQPSQSNQPSQPSSEAPPQDKRKQRPTDRVRSRSNKNAPPSMTDVEPSDAYQMPLSDSDSD* 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00509 813 MobiDBLite consensus disorder prediction 752 769 - -
Rops10g00509 813 CDD DnaJ 159 209 IPR001623 -
Rops10g00509 813 ProSiteProfiles dnaJ domain profile. 158 220 IPR001623 -
Rops10g00509 813 MobiDBLite consensus disorder prediction 752 813 - -
Rops10g00509 813 Pfam Cytochrome b-c1 complex subunit 8 1 71 IPR020101 GO:0005750|GO:0070469
Rops10g00509 813 Gene3D - 6 73 IPR036642 GO:0005750|GO:0006122
Rops10g00509 813 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 16 127 813 - -
Rops10g00509 813 SUPERFAMILY Chaperone J-domain 148 220 IPR036869 -
Rops10g00509 813 MobiDBLite consensus disorder prediction 770 784 - -
Rops10g00509 813 Gene3D DnaJ domain 153 235 IPR036869 -
Rops10g00509 813 Pfam DnaJ domain 159 217 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00509 Rops-Chr10 13373909 13404306 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00509 1 71 Chloroplast and Mitochondria Gene Families AT3G10860 71.831 2.04e-30 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00509 - - gmx:100820244 1160.59